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Protein Overview: gi|115478352, gi...

General Information:
Name(s) found: gi|50251645 [NCBI NR]
gi|222641216 [NCBI NR]
gi|115478352 [NCBI NR]
gi|113631004 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|50251645|dbj|BAD29648.1| thyroid hormone receptor-associated protein complex component TRAP170-like protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|222641216|gb|EEE69348.1| hypothetical protein OsJ_28670 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115478352|ref|NP_001062771.1| Os09g0281900 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113631004|dbj|BAF24685.1| Os09g0281900 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 1740 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEGELGQQT VELGAVVRRA AEESYLSLRE LVEKSQDEGE GKGGAYGARQ RSDSEKKIDL  60
   61 LKFIARTRQR MLRLHVLAKW CQQVPLVNYC QQLGSTLSSH ETCFTQTADS LYFMHEGLQQ 120
  121 ARAPMFDIPS ALEVMLTGNY QRLPLCIEDI GSQNKLSPDE EKRALQKLNA SVRYKVLVTP 180
  181 RPKEVSNVSV ADGIAVFRVD GEFKVLLTLG YRGHLDLWRI LHLEVLVGDK GGPIKLEERR 240
  241 RFALGDDIER RMAVSENPFM VLYAILHELC ISLAMDTIIR KTNVLRQGRW KDAIRSELVL 300
  301 DSTTGQTGSA PLMQLGQDGE YDLSGSRIPG LKINYWLDEK AGGSAESDSS PFIKIEARQD 360
  361 MQIKCQHSSF ILDPLTDKEA NLSLDLCCID VEQLILRAIA SNRHTRLLDI QRQLSKNVQI 420
  421 SQSPKDVILK RDVEIAKDPV KKTEQKDFAD CCGNEVLQVR AYGQAYIGLG INIRSGRFLL 480
  481 QSPENILPPS ALLDCEEALN KGSITATDVF ASLRTRSILH LFAATGSFFG LKVYEKSQGT 540
  541 LKIPKDILHG SDLMVMGFPQ CANAYYLLMQ LDKDFRPVFH LLETQSDAND KTNTNACTKE 600
  601 ALRFNKIDIG QIQISKSESN TNMFDAKLHA LQNIGNCDDV MENRLPIQSG IEPLPLLPAC 660
  661 SPSFSSVVDE VFEYEHGALA VPNHSLPQTT LQSTSHPGSL SVGFQGVGTR ANASIEGASS 720
  721 AYSGSKFSPG VGLNSYLPSN LRHVQSTNAF SSSTVTKSSS IKLPSSNSNH ELSSLSSPTE 780
  781 HVIADGSKSL QLVPASKING SINLITMGSD GASRKRSISD LFLNLPSLQG LKPSSPRKRR 840
  841 RISESMESWS PLQAYSSDSQ SRTSLTYGNI LAERNNCVPA TTYASVLLHV IRHCSLSIKH 900
  901 AQITAQMDSL AIPYVEEVGL RSPSSNLWLR LPFARDDSWK HICLRLGKAG SMSWDVRIND 960
  961 PHFRELWELS TGSTTTSWGV GVRVANTSEM DSHISFDAEG VILTYSNVEP DSVQKLVSDL1020
 1021 RRLANARSFA RGMRRLIGVK LNDKLDDDQT STDIKSQPVN KGNSDAADRL SEQMRKTFRI1080
 1081 EAVGLMSLWF SYGTMPMVHF VVEWESAKGG CTMHVSPDQL WPHTKFLEDF VNGGEVASFL1140
 1141 DCIRLTAGPL LALGGAIRPA RMPVTVSSGY NSMPKQMNNI PTQGPLANGS SSTTMHHAPS1200
 1201 PANVAATHLG SHNLHTAAML SAAGRGGPGL VPSSLLPFDV SVVLRGPYWI RIIYRKKFSV1260
 1261 DMRCFAGDQV WLQPATPPKG GPLVGGSLPC PQFRPFIMEH VAQGLNALEP SFMNATQAGA1320
 1321 HLNSSAGTLQ PAPNANRVNA TQGIGMSRPA SGVANHVAAN LSRAGNAMLA SSGLASGIGG1380
 1381 ASVRLTSGAN LPVHVKGELN TAFIGLGDDG GYGGGWVPLA ALKKVLRGIL KYLGVLWLFA1440
 1441 QLPELLKEIL GSILKENEGA LLNLDQEQPA LRFYVGGYVF AVSVHRVQLL LQVLSVKRFH1500
 1501 HQQQQQQAQN SAQEELAPPE INEICDYFSR RVASEPYDAS RVASFITLLT LPISVLREFL1560
 1561 KLIAWKKGFS QAHGDMATAQ RARIEICLEN HSGSVSDDIT ESTLAKSNVK YDRAHSSLEF1620
 1621 ALTFVLDHAL IPHMNVAGGA AWLPYCVSVR LKYSFGESNH IAYLAMDGSH GGRACWLQYE1680
 1681 DWERCKQKVA RAVETVNGSV AVGESGQGRL RMVAEMIQKQ LQLCLQQLRD GPLSAGSTAS1740
 1741

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..93] MSA 1.044988 View MSA. No confident structure predictions are available.
    2 View Details [94..292] MSA 1.048974 View MSA. No confident structure predictions are available.
    3 View Details [293..422] deduced N/A No confident structure predictions are available.
    4 View Details [423..585] MSA 1.038991 View MSA. No confident structure predictions are available.
    5 View Details [586..700] deduced N/A No confident structure predictions are available.
    6 View Details [701..834] deduced N/A No confident structure predictions are available.
    7 View Details [835..1060] deduced N/A No confident structure predictions are available.
    8 View Details [1061..1180] deduced N/A No confident structure predictions are available.
    9 View Details [1181..1332] deduced N/A No confident structure predictions are available.
    10 View Details [1333..1465] deduced N/A No confident structure predictions are available.
    11 View Details [1466..1638] deduced N/A No confident structure predictions are available.
    12 View Details [1639..1740] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle