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Protein Overview: gi|66792676, gi|...

General Information:
Name(s) found: gi|66792676 [NCBI NR]
gi|51971411 [NCBI NR]
gi|51968928 [NCBI NR]
gi|51968920 [NCBI NR]
gi|42569467 [NCBI NR]
Description(s) found:
Found 14 descriptions.
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  • gi|66792676|gb|AAY56440.1| At2g30350 [Arabidopsis thaliana] [NCBI NR]
  • gi|51971411|dbj|BAD44370.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|51968928|dbj|BAD43156.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|51968920|dbj|BAD43152.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|42569467|ref|NP_180594.2| endo/excinuclease amino terminal domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 368 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA][ISS]
    Biological Process: DNA repair [IEA][ISS]
    Molecular Function: nuclease activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREKRGNRKA LDPVGEDGVT GKDGKGFFAC YLLTSLSPRH KGQTYIGFTV NPRRRIRQHN  60
   61 GEITSGAWRT KKKRPWEMVL CIYGFPTNVS ALQFEWAWQH PRESVAVREA AAAFKSFSGV 120
  121 ASKIKLVYTM LNLPAWNSLN LTVNYFSSKY AHHGGKSPSL PLHMKVQVCA MEDLQYFTKV 180
  181 DDSSQPEDEE SPEVNEEDDD DDDDDSSNLS QPGNSNTSSS DDRHFEKAKE PVTVFDEEDR 240
  241 LANFSGFGLL DEEETVEDEV SHITVGSIRA TEKEPETVFN DRLASFTCFG LVEIVEDEVS 300
  301 HGTIGSTEAM EKECRKRRNH ITSTTTEVDV EVIDLMTPSP SCRAGSSMKR RRVSEFIDLT 360
  361 MSPNFIES

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..131] PSI-BLAST 21.221849 Solution NMR structure of the UPF0213 protein BH0048 from Bacillus halodurans. Northeast Structural Genomics target BhR2.
    2 View Details [132..368] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.74

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle