Protein Overview: gi|29539342

General Information:
Name(s) found:	gi\|29539342 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|29539342\|dbj\|BAC67672.1\| DNA-directed RNA polymerase II largest subunit [Cyanidioschyzon merolae] [NCBI NR] DNA-directed RNA polymerase II largest subunit [Cyanidioschyzon merolae] [nrdb_11152004_Chlamydomonas]
Organism:	Cyanidioschyzon merolae strain 10D
Length:	1819 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYDLQTFSS AELKAVGAVQ FGLLSPDELR RLSVVRVEYD VAFERGVPKA GGVLDPRLGA  60
   61 IDRNFPCATC EGSSIDCPGH FGHIELVKPV FNVLMLSTVL KTLRCVCYYC SRLLVDGSDS 120
  121 RMLRAARIKD PVKRFQAVFQ LCNGTRVCGG GADSSEEQLM LPAAVLEARE RIGKPREGCG 180
  181 NLQPHVTRDG LRILAEFPDA EAFAAERKQE LAAERVQQIF RHIRDEDLEL LGFHPRFSRP 240
  241 EWMVLSVLPV PPPHVRPSIQ MDAVSRGEDD LTFKLGDIIK ANNALQRLEA EGAPAHVIRE 300
  301 QYVLLQFHVA TFMNNDLPGM PRATLRSGRP LKSIAQRLKG KEGRVRNNLM GKRVNFSART 360
  361 VITADPQLAL DEVGVPRSVA MTLTYPEVVT PYNIDRLWEA VRNGPNAYPG ALFVIRNDGK 420
  421 RIALQFVRRS ADIVLEPGCV VERHLLNGDL VLFNRQPSLH RMSIMGHRVR ILPYSTFRMN 480
  481 LSATSPYNAD FDGDEMNLHV PQSEEVRAEI KELMAVPKNI VSPQANRPVM GIVQDSLLGC 540
  541 MLFTLRDTFL EEDTVFNLLL HLPHFDGRIP APAILKPRPL WTGKQIFSLL LPDGVNLERL 600
  601 SNGHPDHERT IMTPSDTRVL IQNGELITGI VDKRTVGSSA GSLIHVTWKE SGPERTSQLI 660
  661 SDIQLLINYW LMQNGMSIGI GDCIADAHTM AAINRTIQEA KDEVRQLIRL AQEGRLERQP 720
  721 GKTMLESFEA CVNRVLNSAR DKAGGFAQES LLPSNNIKRM VSAGSKGSFI NVSQIVACVG 780
  781 QQNVEGKRIP YGFRRRTLPH FVVDDLSPEA RGFVENSYLR GLTPEEVFFH AMGGREGLID 840
  841 TAVKTAETGY IQRRLMKAME DIRIEYDGTV RNSLGDVMQF LYGDDAADGA MLEVQELRLV 900
  901 RASNQEMEAL FRLDVYDRDF GLGYIEPDLI DAVRTDPEVA LELEEEYQQL LADREQLCAV 960
  961 FPTGEAKWPL MVNVQRLIQN CRSIFGIQHD TLSDLHPRQI IQGVRVLLQR CVVVPGDDEL1020
 1021 SREAQRNAVL LFAAHVRAEL ATKRVLQIHR LNSKAFAWLL GEIETRFVRA RATPGEMVGA1080
 1081 VAAQSLGEPA TQMTLNTFHF AGVSAKNVTL GVPRLKELIN VARQAKTPSV TVYLKSGKDK1140
 1141 ELANIVQSEL EQCRLRDVVE SSAIYFDPDP ANTVVEADRE WVRDYFDLPD EMDRPERLSP1200
 1201 WLLRIVLSTE MMIDKRLRLS DVARRLRAEF GGDLSVVYSD DNAEQLVMHI RMAGDEYEKG1260
 1261 ALGVPILGES ERLDDTLNLL GPGDMTAGGN QSLEALDSGT VEEQDDVFLK RIELALLEDM1320
 1321 QLKGIPGIRK VFLRQTQRVL FDPEAGSFRS APEWVLDTEG TALLAVLSHP DVDARRTISN1380
 1381 EITEVLQVLG IEAARQALYN EMYAVLSFDG SSVGYRHLAL LVEVMTCRGM LIPVSRFGIN1440
 1441 RLETGPLMRC TFEETVEILA TAATFGVRDA CEGVSQAVIL GQRAKVGTGA FSLTLDESVL1500
 1501 NQAETETSVA AVRDAHVGGV FAKAYAAADV DADHWTPAYT PGATPGMASD GFAAPWTPSL1560
 1561 NLASPYGSFS PAVGFSPATS TYVGGDAMKD AGRYGLGGTS PFASFSASAT TPNWAPSPAG1620
 1621 GGTGTLGAFS PSSPAYSPTS PRLVSPTSPA YSPTSPAYSP TSPAYSPTSP AYSPTSPAYS1680
 1681 PTSPAYSPTS PAYSPSSPNV AYSPSSPNVA YSPSSPNVAY SPSSPNVAYS PSSPNVAYSP1740
 1741 SSPNVAYSPS SPNVAYSPSS PNVAYSPSSP NVAYSPSSPV AYSPSSPNVA YSPSSPNVAY1800
 1801 SPSSPAFSPS SPVYSPKNK

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.98

Protein Overview: gi|29539342

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: