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Protein Overview: VAB_ARATH

General Information:
Name(s) found: VAB_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|25083665|gb|AAN72103.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|22331920|ref|NP_191889.2| phosphoinositide binding [Arabidopsis thaliana] [NCBI NR]
  • gi|17064860|gb|AAL32584.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • VAN3-binding protein OS=Arabidopsis thaliana GN=VAB PE=1 SV=1 [Swiss-Prot]
  • putative protein [Arabidopsis thaliana]gi|25083665|gb|AAN72103.1| putative protein [Arabidopsis thaliana]gi|22331920|ref|NP_191889.2| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G22810.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81204.1); contains InterPro domain Pleckstrin-like, plant (InterPro:IPR013666); contains InterPro domain Protein of [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G22810.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81204.1); contains InterPro domain Pleckstrin-like, plant (InterPro:IPR013666); contains InterPro domain Protein of unknown function DUF828, plant (InterPro:IPR008546) | chr3:23396008-23398600 FORWARD [TAIR_A_Thaliana_na_04-12-2008_reversed.fasta]
  • | Symbols: FKD1 | FORKED 1 | chr3:23385033-23387625 FORWARD LENGTH=498 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Protein forked1 OS=Arabidopsis thaliana GN=F16M2_150 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 498 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: signal transduction [ISS]
    Molecular Function: phosphoinositide binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERELRRPNP INSSRRPEIF SSGGSSTQLP ESPRGPMEFL SRSWSVSALE VSRALHTAKS  60
   61 ASATNRPPSS INTPIPEETL NPEKEECPPE NSTSVSSQFS FAASATSQLV LERIMSQSEV 120
  121 SPLTSGRLSH SSGPLNGGGS FTETDSPPIS PSDEFDDVIK YFRTHNTIHP LFSGTGGSRG 180
  181 TTGNGSNTPM AGTGPKTVGR WLKDRKEKKK EETRTQNAQV HAAVSVAAVA SAVAAVAAAT 240
  241 AASSPGKNEQ MARIDMAMAS AAALVAAQCV EAAEIMGADR DHLTSVVSSA VNVKSHDDIV 300
  301 TLTAAAATAL RGAATLKARA LKEVWNIAAV LPAEKGASSA LCGQVDTKHS DSSFSGELPV 360
  361 AGEDFLGVCN QELLAKGTEL LKRTRGGELH WKIVSVYINK AGQAVLKMKS KHVGGTFTKK 420
  421 KKHMVLEVRK DIPAWAGRDL FNGDKHHYFG LKTETKRVIE FECRNQREYE IWTQGVSRLL 480
  481 AIAAEKKQKS SMSKWMAP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..133] deduced N/A No confident structure predictions are available.
    2 View Details [134..375] MSA 1.024983 View MSA. No confident structure predictions are available.
    3 View Details [376..498] Pfam 70.0 No description for PF08458.1 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.43

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle