YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|190908103, gi...

General Information:
Name(s) found: gi|191171476 [NCBI NR]
gi|190908103 [NCBI NR]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • gi|191171476|ref|ZP_03033024.1| shikimate kinase [Escherichia coli F11] [NCBI NR]
  • gi|190908103|gb|EDV67694.1| shikimate kinase [Escherichia coli F11] [NCBI NR]
    • Organism: Escherichia coli F11
    Length: 225 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDLFSCQTR WSIEIIFSLT LAISYEVSVH VLRRSLSEAG LSLTNSLSST EKMAEKRNIF  60
   61 LVGPMGAGKS TIGRQLAQQL NMEFYDSDQE IEKRTGADVG WVFDLEGEEG FRDREEKVIN 120
  121 ELTEKQGIVL ATGGGSVKSR ETRNRLSARG VVVYLETTIE KQLARTQRDK KRPLLHVETP 180
  181 PREVLEALAN ERNPLYEEIA DVTIRTDDQS AKVVANQIIH MLESN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] FFAS03 1.07 The X-ray Structure of the Papillomavirus Helicase in Complex with its Molecular Matchmaker E2
    2 View Details [81..225] PSI-BLAST 38.09691 Shikimate kinase (AroK)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.37148167194523 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.64

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle