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Protein Overview: gi|190404922

General Information:
Name(s) found: gi|190404922 [NCBI NR]
Description(s) found:
  • gi|190404922|gb|EDV08189.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] [NCBI NR]
    • Organism: Saccharomyces cerevisiae RM11-1a
    Length: 565 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKKEPHIKA LSNLKNSERK KLLQTFQKQT NNEEYSFRTS TIKQTNFNGQ KSVGTVYTDE  60
   61 NNTPILFKEK HKEQLFPTVY SCWEYPALLP IVLTHGFVIE EHLFNGANLM ISGSIPPFDP 120
  121 RCKIGTLCGI ASKQAPETVL AIGIVELDLP SFDKVIGETG VAVKIIHHFN DGLSKVFKMK 180
  181 LEPPFVLSTQ SKDNNISSKQ IESSEQIKAV EKEQEDVKEA SVDVEEIAEV LDHFTVSDVD 240
  241 YFITRALYYT LTQDKGLELP ISASNFISNH IMRNLPPIDH NEVNVKKTSW KKSAKFLKHF 300
  301 EKEGFLKLKG KGDDLTIVGK NTDKDELKNF VPYKLGCSKS ATESRESTTS KEKTSGMMYS 360
  361 LTLYKPFNLA KDLLKEVNLA SHTYYTSQDI RSAVSQYISV KNLADTKDKG KVIMDDLLFD 420
  421 MVNKKKKVLN ASRIIARGEI LHPLLTNNFT EFYQIFKSDD TLLFKAPMKG SLPHIKIITE 480
  481 MKIGRKVITR VSNFEVFQVD PESLAADLRK ICSGSTTISE SQTFKCAEVQ VQGPHGQSII 540
  541 DHLNKLGIPS KWIDFENKLK KKKRK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..59] PSI-BLAST 3.69897 Pseudouridine synthase II TruB, C-terminal domain; Pseudouridine synthase II TruB
    2 View Details [60..193] PSI-BLAST 12.30103 Archaeosine tRNA-guanine transglycosylase, C3 domain; Archaeosine tRNA-guanine transglycosylase, N-terminal domain; Archaeosine tRNA-guanine transglycosylase, C2 domain
    3 View Details [194..436] deduced N/A No confident structure predictions are available.
    4 View Details [437..565] ORFEUS 10.0 YciH

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  0.578545460864021 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle