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Protein Overview: gi|222847188, gi...

General Information:
Name(s) found: gi|224059606 [NCBI NR]
gi|222847188 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|224059606|ref|XP_002299930.1| predicted protein [Populus trichocarpa] [NCBI NR]
  • gi|222847188|gb|EEE84735.1| predicted protein [Populus trichocarpa] [NCBI NR]
    • Organism: Populus trichocarpa
    Length: 381 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN  60
   61 IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID NVKAKIQDKE GIPPDQQRLI 120
  121 FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA 180
  181 KIQDKEGIPP DQQRLIFAGK QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT 240
  241 ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR 300
  301 LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL 360
  361 ADYNIQKEST LHLVLRLRGG Y

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..72] PSI-BLAST 17.39794 Ubiquitin
    2 View Details [73..139] Pfam 34.09691 No description for PF00240.15 was found. No confident structure predictions are available.
    3 View Details [140..243] PSI-BLAST 29.522879 No description for 2k25A was found.
    4 View Details [244..293] Pfam 37.537602 No description for PF00240.15 was found. No confident structure predictions are available.
    5 View Details [294..381] PSI-BLAST 31.39794 No description for 2ojrA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle