YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|162694315, gi...

General Information:
Name(s) found: gi|168003988 [NCBI NR]
gi|162694315 [NCBI NR]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • gi|168003988|ref|XP_001754694.1| predicted protein [Physcomitrella patens subsp. patens] [NCBI NR]
  • gi|162694315|gb|EDQ80664.1| predicted protein [Physcomitrella patens subsp. patens] [NCBI NR]
    • Organism: Physcomitrella patens subsp. patens
    Length: 414 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLEATMVCM DNSEWMRNGD YSPTRFQAQA DAINLICGAK TQSNPENTVG VLTMAGKGPR  60
   61 VLITPTNDLG KILQALHGLE VGGEMRMTSG VQVAQLALKH RQNKHQRQRI VLFAGSPVLA 120
  121 DKAVLEGMGK KLKKNNVALD IVSFGEDDGE KVEKLEALLN AVNNGDNSHI VHIPGGERVL 180
  181 SDVLISSSIF TGDGEGGSGF AAAAAASAAA AAVGGGGGAY DFGVDPNLDP ELALALRVSM 240
  241 EEERARQEAA MKRSAEDSTA KGQQAGESSS APDVAMSDVG LVDTTDKSKD MMIDDDTALL 300
  301 QQAIAMSMAQ AAQAAAAAGG GPATTDTSME ESGGDDQDLA YALQMSMQQA AAAASAAQGS 360
  361 ADVNQVLGDQ SFVSSVLSSL PGVDPNDPNV RDVLASLQTD EGKNDDQATK DKSK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..186] PSI-BLAST 7.69897 No description for 2b2xA was found.
    2 View Details [187..414] PSI-BLAST 12.39794 Structure of S5a bound to monoubiquitin provides a model for polyubiquitin recognition


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle