YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|220947170, gi...

General Information:
Name(s) found: gi|220956676 [NCBI NR]
gi|220947170 [NCBI NR]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • gi|220956676|gb|ACL90881.1| CG8709-PA [synthetic construct] [NCBI NR]
  • gi|220947170|gb|ACL86128.1| CG8709-PA [synthetic construct] [NCBI NR]
    • Organism: synthetic construct
    Length: 1089 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLARVFSN FRDFYNDINA ATLTGAIDVI VVEQRDGEFQ CSPFHVRFGK LGVLRSREKV  60
   61 VDIEINGVPV DIQMKLGDSG EAFFVEECLE DEDEELPANL ATSPIPNSFL ASRDKANDTM 120
  121 EDISGVVTDK NASEELLLPL PLPRRNSIDF SKEEPKEAVV EGSKFENQVS DYTQRRHTDN 180
  181 TLERRNLSEK LKEFTTQKIR QEWAEHEELF QGEKKPADSD SLDNQSKASN EAETEKAIPA 240
  241 VIEDTEKEKD QIKPDVNLTT VTTSEATKEV SKSKTKKRRK KSQMKKNAQR KNSSSSSLGS 300
  301 AGGGDLPSAE TPSLGVSNID EGDAPISSAT NNNNTSSSND EQLSAPLVTA RTGDDSPLSE 360
  361 IPHTPTSNPR LDLDIHFFSD TEITTPVGGG GAGSGRAAGG RPSTPIQSDS ELETTMRDNR 420
  421 HVVTEESTAS WKWGELPTPE QAKNEAMSAA QVQQSEHQSM LSNMFSFMKR ANRLRKEKGV 480
  481 GEVGDIYLSD LDAGSMDPEM AALYFPSPLS KAASPPEEDG ESGNGTSLPH SPSSLEEGQK 540
  541 SIDSDFDETK QQRDNNRYLD FVAMSMCGMS EQGAPPSDEE FDRHLVNYPD VCKSPSIFSS 600
  601 PNLVVRLNGK YYTWMAACPI VMTMITFQKP LTHDAIEQLM SQTVDGKCLP GDEKQEAVAQ 660
  661 ADNGGQTKRY WWSWRRSQDA APNHLNNTHG MPLGKDEKDG DQAAVATQTS RPTSPDITDP 720
  721 TLSKSDSLVN AENTSALVDN LEELTMASNK SDEPKERYKK SLRLSSAAIK KLNLKEGMNE 780
  781 IEFSVTTAYQ GTTRCKCYLF RWKHNDKVVI SDIDGTITKS DVLGHILPMV GKDWAQLGVA 840
  841 QLFSKIEQNG YKLLYLSARA IGQSRVTREY LRSIRQGNVM LPDGPLLLNP TSLISAFHRE 900
  901 VIEKKPEQFK IACLSDIRDL FPDKEPFYAG YGNRINDVWA YRAVGIPIMR IFTINTKGEL 960
  961 KHELTQTFQS SGYINQSLEV DEYFPLLTNQ DEFDYRTDIF DDEESEEELQ FSDDYDVDVE1020
 1021 HGSSEESSGD EDDDEALYND DFANDDNGIQ AVVASGDERT ADVGLIMRVR RVSTKNEVIM1080
 1081 ASPPKWINS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] Pfam 74.275724 No description for PF04571.5 was found. No confident structure predictions are available.
    2 View Details [112..294] deduced N/A No confident structure predictions are available.
    3 View Details [295..457] MSA 2.261994 View MSA. No confident structure predictions are available.
    4 View Details [458..764] deduced N/A No confident structure predictions are available.
    5 View Details [765..834] PSI-BLAST 11.0 Crystal Structure of MDC1 Tandem BRCT Domains
    6 View Details [835..1089] FFAS03 1.16 No description for 2i33A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle