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Protein Overview: gi|218198379

General Information:
Name(s) found: gi|218198379 [NCBI NR]
Description(s) found:
  • gi|218198379|gb|EEC80806.1| hypothetical protein OsI_23355 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 544 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAASSES ADAAAAGPST LSIYKAARRI KRRESTLYNA LRSVADDAAF VAEIAALWPA  60
   61 LPLVANLRCG LWYLPPRAVA ATCYFKSTDG HAGNWAFSTA RLNLHLALLA GERGGCIIVD 120
  121 STRRGKRFPD SMSKTIPIWC CVLNRAIERY RLQTNNKSAA VANKDAEKIS ESSNWDNSVH 180
  181 LPVWVLETEK NAIEGRIEEW TTQFESCGAD IRSLALSLKK PLRPLWISQR TRIWLNEVPE 240
  241 LESWDFTPII LVSASASGAV ATQRMTSEFS WHYIPGAGDD EESWARGLTP TLFWKHSYDL 300
  301 LDGGPDLCNQ LVADIVEKDR VYRAQRGEYS PQITAKPLKC SSHDGPFSNG DHTSIVQPMD 360
  361 SDPPTVTAMD KQNSSDGHIL FWIGTSNLAV ASTLQVGDSL AEVDCILNCD STSNLPLTSS 420
  421 ENSYLELPMV GSKDDRFSLM KNLPKAVSFA NRNLIAGKKL LICCQNGEDI SICVALAIIT 480
  481 RLFDCDGFFD HGNSFLKGDV TKLEMRKRLV FVCKYAVNAR PSRGNLKQVY GFLCSEKEQF 540
  541 SCLT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..157] MSA 1.026944 View MSA. No confident structure predictions are available.
    2 View Details [158..336] deduced N/A No confident structure predictions are available.
    3 View Details [337..544] PSI-BLAST 27.69897 No description for 2pq5A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle