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Protein Overview: RAPZ_YERPP

General Information:
Name(s) found: RAPZ_YERPP [Swiss-Prot]
Description(s) found:
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  • gi|162202302|ref|YP_001161703.2| hypothetical protein YPDSF_0311 [Yersinia pestis Pestoides F] [NCBI NR]
  • UPF0042 nucleotide-binding protein YPDSF_0311 OS=Yersinia pestis (strain Pestoides F) GN=YPDSF_0311 PE=3 SV=2 [Swiss-Prot]
  • RNase adapter protein RapZ OS=Yersinia pestis (strain Pestoides F) GN=rapZ PE=3 SV=2 [Swiss-Prot]
    • Organism: Yersinia pestis Pestoides F
    Length: 284 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLMIVSGRS GSGKSVALRA LEDMGFYCVD NLPVVLLPQL ASTLADRNIS AAVSIDVRNM  60
   61 PESPEVFEHA MTQLPDSFSP QLLFLDADRN TLIRRYSDTR RLHPLSAKNL SLESAIDEES 120
  121 DLLEPLRSRA DLIIDTSEMS VHELAEMLRT RLLGKREREL TMVFESFGFK HGIPIDADYV 180
  181 FDVRFLPNPH WDPKLRPMTG LDKPVISFLD RHTEVHNFIY QTRSYLEQWL PMLETNNRSY 240
  241 LTVAIGCTGG KHRSVYVAEQ LADYFRARGK NVQSRHRTLE KRKQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..154] FFAS03 3.39 No description for 2iyqA was found.
    2 View Details [155..284] Pfam 16.886057 No description for PF03668.6 was found. Confident ab initio structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.48172144551427 bayes_pls_golite062009
  • catalytic activity
    		•  0.942640875796745 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.00977334280765782 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle