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Protein Overview: gi|190408309

General Information:
Name(s) found: gi|190408309 [NCBI NR]
Description(s) found:
  • gi|190408309|gb|EDV11574.1| protein CHL12 [Saccharomyces cerevisiae RM11-1a] [NCBI NR]
    • Organism: Saccharomyces cerevisiae RM11-1a
    Length: 741 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDTAPYIGS LGRSSLFDTG DIEQAPGNNA IGINEEDIHA FVSSTGETVQ LKKKPAKLAT  60
   61 GNISLYTNPD TVWRSDDTYG ININYLLDKI EASGDDRTNA QKTSPITGKI GSDTLWVEKW 120
  121 RPKKFLDLVG NEKTNRRMLG WLRQWTPAVF KEQLPKLPTE KEVSDMELDP LKRPPKKILL 180
  181 LHGPPGIGKT SVAHVIAKQS GFSVSEINAS DERAGPMVKE KIYNLLFNHT FDTNPVCLVA 240
  241 DEIDGSIESG FIRILVDIMQ SDIKATNKLL YGQPDKKDKK RKKKRSKLLT RPIICICNNL 300
  301 YAPSLEKLKP FCEIIAVKRP SDTTLLERLN LICHKENMNI PIKAINDLID LAQGDVRNCI 360
  361 NNLQFLASNV DSRDSSASDK PACAKNTWAS SNKDSPISWF KIVNQLFRKD PHRDIKEQFY 420
  421 ELLNQVELNG NSDRILQGCF NIFPYVKYSD NGIRKPANIS DWLFFHDLMY QSMYAHNGEL 480
  481 LRYSALVPLV FFQTFGDIAN KDDIRMKNSE YEQRELKRAN SDIVSLIMRH ISVQSPLMAS 540
  541 FTDRKSLIFE ILPYLDSMIS SDFNKIRNLK LKQAIMEELV QLLKSFQLNL IQNRSEGFDV 600
  601 RGGLTIDPPI DEVVLLNPKH INEVQHKRAN NLSSLLAKIE ENRAKKRHID QVTEDRLQSQ 660
  661 EMHSKKVKTG LNSSSSTIDF FKNQYGLLKQ TQELEETQKT IGSDETNQAD DCNQTVKIWV 720
  721 KYNEGFSNAV RKNVTWNNLW E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] PSI-BLAST 104.165202 Membrane fusion atpase p97 N-terminal domain , P97-Nn; Membrane fusion atpase p97, D1 domain; Membrane fusion atpase p97 domain 2, P97-Nc
    2 View Details [123..319] PSI-BLAST 104.165202 Membrane fusion atpase p97 N-terminal domain , P97-Nn; Membrane fusion atpase p97, D1 domain; Membrane fusion atpase p97 domain 2, P97-Nc
    3 View Details [320..441] PSI-BLAST 104.165202 Membrane fusion atpase p97 N-terminal domain , P97-Nn; Membrane fusion atpase p97, D1 domain; Membrane fusion atpase p97 domain 2, P97-Nc
    4 View Details [442..654] MSA 1.333991 View MSA. No confident structure predictions are available.
    5 View Details [655..741] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle