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Protein Overview: gi|214003353

General Information:
Name(s) found: gi|214003353 [NCBI NR]
Description(s) found:
  • gi|214003353|ref|ZP_03414088.1| exoribonuclease R [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] [NCBI NR]
    • Organism: Salmonella enterica subsp. enterica serovar Typhi str. E98-3139
    Length: 812 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQDPFQERE AEKYANPIPS REFILEHLTK REKPASREEL AVELNIEGEE QLEALRRRLR  60
   61 AMERDGQLVF TRRQCYALPE RLDLLKGTVI GHRDGYGFLR VEGRKDDLYL SSEQMKTCIH 120
  121 GDQVLAQPLG ADRKGRREAR IVRVLVPKTS QIVGRYFTDA GVGFVVPDDS RLSFDILIPP 180
  181 EDVMGARMGF VVVVELTQRP TRRTKAVGKI VEVLGDNMGT GMAVDMALRT HEIPYIWPQA 240
  241 VEQQVAGLKE EVPEEAKVGR VDLRDLPLVT IDGEDARDFD DAVYCEKKRG GGWRLWVAIA 300
  301 DVSYYVRPPT PLDREARNRG TSVYFPSQVV PMLPEVLSNG LCSLNPQVDR LCMVCEMTIS 360
  361 AKGRLTGYKF YEAVMSSHAR LTYTKVWHML QGDQDLREQY APLVKHIEEL HNLYKVLDKA 420
  421 REERGGISFE SEEAKFIFNA ERRIERIEQT QRNDAHKLIE ECMIMANISA ARFVEKAKEP 480
  481 ALFRIHDKPT TEAITSFRSV LAELGLELPG GNKPEPRDYA ELLESIADRP DAEMLQTMLL 540
  541 RSMKQAIYDP ENRGHFGLAL QSYAHFTSPI RRYPDLSLHR AIKYLLAKEQ GNKGNTTETG 600
  601 GYHYSMEEML QLGQHCSMAE RRADEATRDV SDWLKCDFML DQVGNVFKGV IASVTGFGFF 660
  661 VRLDELFIDG LVHVSSLDND YYRFDQVGQR LIGESGGQTY RLGDRVEVRV EAVNMDERKI 720
  721 DFSLISSERA PRNVGKTARE KAKKGESKNA GKRRQVGKKV NFEPDSAFRG EKKAKPKAAK 780
  781 KDARKAKKPS AKTQKIAAAT KAKRAAKKKA AE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..731] PSI-BLAST 135.0 No description for 2id0A was found.
    2 View Details [732..812] FFAS03 1.08 No description for 2j63A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle