YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|213425784

General Information:
Name(s) found: gi|213425784 [NCBI NR]
Description(s) found:
  • gi|213425784|ref|ZP_03358534.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] [NCBI NR]
    • Organism: Salmonella enterica subsp. enterica serovar Typhi str. E02-1180
    Length: 315 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSLRIIFA GTPDFAARHL DALLTSGHNI VGVFTQPDRP AGRGKKLMPS PVKVLAEEKG  60
   61 LPVFQPVSLR PQENQHLVAD LHADVMVVVA YGLILPKAVL DMPRLGCINV HGSLLPRWRG 120
  121 AAPIQRSLWA GDAETGVTIM QMDVGLDTGD MLYKLACPIT AEDTSGSLYN KLAELGPQGL 180
  181 ITTLKQLADG TATPEAQNEA LVTHAEKLSK EEARIDWSLS AAQLERCIRA FNPWPMSWLE 240
  241 IDGQPVKVWQ ASVIEDATQS LPGTILAATK QGIQVATGKG ILNLLSLQPA GKKAMSAQDL 300
  301 LNSRREWFIP GNRLA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..315] PSI-BLAST 108.0 Methionyl-tRNAfmet formyltransferase, C-terminal domain; Methionyl-tRNAfmet formyltransferase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • methionyl-tRNA formyltransferase activity
    		•  5.51013755462273 bayes_pls_golite062009
  • hydroxymethyl-, formyl- and related transferase activity
    		•  5.19882604023997 bayes_pls_golite062009
  • ligase activity
    		•  2.41579019065074 bayes_pls_golite062009
  • methyltransferase activity
    		•  2.27572765999587 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  2.20102068445328 bayes_pls_golite062009
  • catalytic activity
    		•  2.16003793103722 bayes_pls_golite062009
  • glycine hydroxymethyltransferase activity
    		•  1.99841214906509 bayes_pls_golite062009
  • transferase activity
    		•  1.01502594768782 bayes_pls_golite062009
  • DNA N-glycosylase activity
    		•  0.809924940479886 bayes_pls_golite062009
  • binding
    		•  0.752059276178195 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.698214709916015 bayes_pls_golite062009
  • DNA binding
    		•  0.421388681127685 bayes_pls_golite062009
  • phosphoribosylglycinamide formyltransferase activity
    		•  0.0567687847434473 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing N-glycosyl compounds
    		•  0.0124799003650303 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle