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Protein Overview: gi|220944714, gi...

General Information:
Name(s) found: gi|220954654 [NCBI NR]
gi|220944714 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|220954654|gb|ACL89870.1| Snap-PA [synthetic construct] [NCBI NR]
  • gi|220944714|gb|ACL84900.1| Snap-PA [synthetic construct] [NCBI NR]
    • Organism: synthetic construct
    Length: 292 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDNEQKALQ LMAEAEKKLT QQKGFLGSLF GGSNKVEDAI ECYQRAGNMF KMSKNWTKAG  60
   61 ECFCEAATLH ARAGSRHDAG TCYVDASNCY KKVDVESAVN CLMKSIDIYT DMGRFTMAAK 120
  121 HHQSIAEMYE SDPNNLAKSI QHYEQAADYF KGEESVSSAN KCMLKVAQYA AQLEDYEKAI 180
  181 SIYEQVAASS LESSLLKYSA KEYFFRAALC HLSVDLLNAQ HAIEKYAQQY PAFQDSREFK 240
  241 LIKVLCENLE EQNIEGFTEA VKDYDSISRL DQWYTTILLR IKKAADEDPD LR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..292] PSI-BLAST 24.154902 Vesicular transport protein sec17

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • soluble NSF attachment protein activity
    		•  5.88260989493554 bayes_pls_golite062009
  • binding
    		•  2.09193012129784 bayes_pls_golite062009
  • protein binding
    		•  1.52807685989528 bayes_pls_golite062009
  • signal sequence binding
    		•  1.13935627118933 bayes_pls_golite062009
  • peroxisome targeting sequence binding
    		•  0.158175726439206 bayes_pls_golite062009
  • syntaxin binding
    		•  0.0598606763736398 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle