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Protein Overview: gi|190404923

General Information:
Name(s) found: gi|190404923 [NCBI NR]
Description(s) found:
  • gi|190404923|gb|EDV08190.1| 60S ribosomal protein L1, mitochondrial precursor [Saccharomyces cerevisiae RM11-1a] [NCBI NR]
    • Organism: Saccharomyces cerevisiae RM11-1a
    Length: 285 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSVVAIPKI CVTGPARRCF FHTAKKLYAD DYKPAAMSSN APSLTKDQAK KRELKRLVQR  60
   61 KAEAKRPATA SPLYMPVTKA LRYLRAAEVG RPQSQQTINL TTLVVGERGT APLSGSVTFP 120
  121 KPLRYIKIAA FTNDESKLEE LREKYPNHLI GGADLVAKIK SGEISVDFDK AFATPDIVPA 180
  181 LQSQVARILG PRGVLPSVKK GTVSDDISSL LQESLGSMPF RQRGNSISIG VGKCYFTDRE 240
  241 ILQNIISARA AFKTAVDNQK SKKPNILSKT TLSSTHGPGI VIDFA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..126]
    [211..285]    		 PSI-BLAST 207.70927 70S ribosome functional complex
    2 View Details [127..210] PSI-BLAST 207.70927 70S ribosome functional complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.98821526471491 bayes_pls_golite062009
  • structural molecule activity
    		•  9.4110731269774 bayes_pls_golite062009
  • binding
    		•  1.22345164833203 bayes_pls_golite062009
  • protein binding
    		•  0.542538198836039 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle