YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|221319450

General Information:
Name(s) found: gi|221319450 [NCBI NR]
Description(s) found:
  • gi|221319450|ref|ZP_03600744.1| isopentenyl pyrophosphate isomerase [Bacillus subtilis subsp. subtilis str. JH642] [NCBI NR]
    • Organism: Bacillus subtilis subsp. subtilis str. JH642
    Length: 349 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRAERKRQH INHALSIGQK RETGLDDITF VHVSLPDLAL EQVDISTKIG ELSSSSPIFI  60
   61 NAMTGGGGKL TYEINKSLAR AASQAGIPLA VGSQMSALKD PSERLSYEIV RKENPNGLIF 120
  121 ANLGSEATAA QAKEAVEMIG ANALQIHLNV IQEIVMPEGD RSFSGALKRI EQICSRVSVP 180
  181 VIVKEVGFGM SKASAGKLYE AGAAAVDIGG YGGTNFSKIE NLRRQRQISF FNSWGISTAA 240
  241 SLAEIRSEFP ASTMIASGGL QDALDVAKAI ALGASCTGMA GHFLKALTDS GEEGLLEEIQ 300
  301 LILEELKLIM TVLGARTIAD LQKAPLVIKG ETHHWLTERG VNTSSYSVR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..349] PSI-BLAST 72.69897 Isopentenyl-diphosphate delta-isomerase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.31793084876503 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.59709503080261 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  1.23058140939496 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle