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Protein Overview: gi|213612728

General Information:
Name(s) found: gi|213612728 [NCBI NR]
Description(s) found:
  • gi|213612728|ref|ZP_03370554.1| ribonucleotide-diphosphate reductase subunit alpha [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] [NCBI NR]
    • Organism: Salmonella enterica subsp. enterica serovar Typhi str. E98-2068
    Length: 761 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQSLLVTKR DGRTERINLD KIHRVLDWAA EGLNNVSVSQ VELRSHIQFY DGIKTSDIHE  60
   61 TIIKAAADLI SRDAPDYQYL AARLAIFHLR KKAFGQFEPP ALYHHVVKMV ELGKYDNHLL 120
  121 EDYTEEEFKQ MDSFIVHDRD MTFSYAAVKQ LEGKYLVQNR VTGEIYESAQ FLYILVVACL 180
  181 FSNYPRETRL DYVKRFYDAV STFKISLPTP IMSGVRTPTR QFSSCVLIEC GDSLDSINAT 240
  241 SSAIVKYVSQ RAGIGINAGR IRALGSPIRG GEAFHTGCIP FYKHFQTAVK SCSQGGVRGG 300
  301 AATLFYPMWH LEVESLLVLK NNRGVEGNRV RHMDYGIQIN KLMYTRLLKG GDITLFSPSD 360
  361 VPGLYDAFFA DQDEFERLYV KYENDDSIRK QRVKAVELFS LMMQERASTG RIYIQNVDHC 420
  421 NTHSPFDPVV APVRQSNLCL EIALPTKPLN DVNDENGEIA LCTLSAFNLG AIKTLDELEE 480
  481 LAILAVRALD ALLDYQDYPI PAAKRGAMGR RTLGIGVINF AYWLAKNGKR YSDGSANNLT 540
  541 HKTFEAIQYY LLKASNELAK EQGACPWFNE TTYAKGILPI DTYKKDLDAI VNEPLHYDWE 600
  601 QLRESIKTHG LRNSTLSALM PSETSSQISN ATNGIEPPRG YVSIKASKDG ILRQVVPDYE 660
  661 HLKDAYELLW EMPNNDGYLQ LVGIMQKFID QSISANTNYD PSRFPSGKVP MQQLLKDLLT 720
  721 AYKFGVKTLY YQNTRDGAED AQDDLAPSIQ DDGCESGACK I

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..761] PSI-BLAST 1000.0 R1 subunit of ribonucleotide reductase, N-terminal domain; R1 subunit of ribonucleotide reductase, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
    		•  14.6351774763867 bayes_pls_golite062009
  • ribonucleoside-diphosphate reductase activity
    		•  14.1611243981741 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH or CH2 groups
    		•  13.9924528137471 bayes_pls_golite062009
  • class I ribonucleotide reductase activity
    		•  8.57315924653024 bayes_pls_golite062009
  • catalytic activity
    		•  1.95058695475279 bayes_pls_golite062009
  • binding
    		•  1.06379703329768 bayes_pls_golite062009
  • protein binding
    		•  0.34900723085369 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle