YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|165992535, gi...

General Information:
Name(s) found: gi|166008153 [NCBI NR]
gi|165992535 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|166008153|ref|ZP_02229051.1| ribonuclease E [Yersinia pestis biovar Antiqua str. E1979001] [NCBI NR]
  • gi|165992535|gb|EDR44836.1| ribonuclease E [Yersinia pestis biovar Antiqua str. E1979001] [NCBI NR]
    • Organism: Yersinia pestis biovar Antiqua str. E1979001
    Length: 1221 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRMLINATQ QEELRVALVD GQRLYDLDIE SPGHEQKKAN IYKGKITRIE PSLEAAFVDY  60
   61 GAERHGFLPL KEISREYFPN NYSSHGRPNI KDVLREGQEV IVQVDKEERG NKGAALTTFI 120
  121 SLAGSYLVLM PNNPRAGGIS RRIEGDDRTE LKEALSSLQL PDGMGLIVRT AGVGKSADAL 180
  181 QWDLSFRLKH WDAIKKAAEG RPAPFLIHQE SNVIVRAFRD YLRPDIGEIL IDNPKVLELA 240
  241 KEHIAALGRP DFSSKIKLYS GEIPLFSHYQ IESQIESAFQ REVRLPSGGS IVIDTTEALT 300
  301 AIDINSARAT RGGDIEETAF NTNLEAADEI ARQLRLRDLG GLIVIDFIDM TPVRHQREVE 360
  361 NRLRDAVRQD RARIQIGRIS RFGLLEMSRQ RLSPSLGESS HHVCPRCSGT GTVRDNESLS 420
  421 LSILRLIEEE ALKENTHEVH AIVPVQIASY LLNEKRESVN AIEKRQGGVR AVIVPNDQMQ 480
  481 TPHYSVLRVR KGEEVPSLSY LLPQLHEAEM AQPLEEATIE RKRPEQPALA TFSLPTEVPP 540
  541 EEAPTVAKAK PAVATPAAVS TDVEQPGFFS RLFSGLKNMF GASAEAEVQP AEVVKTDTSE 600
  601 NRRNDRRNPR RQNNGRKERN DRTPREGRDN SSRDNTNRDN TNRDNTSRDN ANRDGANRDN 660
  661 SNRDNSGRDN VSREGREDQR RNNRRPAQPT TTSQGQTEVV EADKAQREEQ PQRRGDRQRR 720
  721 RQDEKRQAPQ EIKADVAEAP VIEEVQPEQE ERQQVMQRRQ RRQLNQKVRI QSANDELNTL 780
  781 ESPVSAPVAQ VVVAEVQEEV KLLPQITAQT DDDSANERTT NNENGMPRRS RRSPRHLRVS 840
  841 GQRRRRYRDE RYPAQSAMPL AGAFASPEMA SGKVWVRYPV TPVVEQVVVE QIAIEQTTTV 900
  901 EQTAIVEQVS VANIVTAQLP VEQVQNTVAE QESSATPSVM TTPTVAVATA AVTLAPQHKP 960
  961 GGSSSSAAAV PGRAPIVAAV PVVAETTAAE TVVAKTEAAI DAVAVVEPMA AVESIAAVET1020
 1021 ATVEPVVTEE PNVTEPAVAE PAIETDPVEE TTSVVEIAPT VEPTPMIEDT AVVVAATVVD1080
 1081 TTPETASTVQ DDIVEETAVE AVNISETVAE ETAITEPAAE AIATQQTTIA QETIAEPTVE1140
 1141 TAIDVVAVVK QPAVAHPEGV VFKHFASAPM TKAPAPDYAP ESPTKGHWER PTFDFSGKGS1200
 1201 AGGHAAATQA TAPATKPQSV E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..526] PSI-BLAST 1000.0 Catalytic domain of E. coli RNase E
    2 View Details [527..877] FFAS03 3.78 30S subunit
    3 View Details [878..1221] FFAS03 2.31 THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle