YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|190407697

General Information:
Name(s) found: gi|190407697 [NCBI NR]
Description(s) found:
  • gi|190407697|gb|EDV10962.1| karyogamy protein KAR9 [Saccharomyces cerevisiae RM11-1a] [NCBI NR]
    • Organism: Saccharomyces cerevisiae RM11-1a
    Length: 644 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNDGPRSMT IGDDFQENFC ERLERIHNTL HSINDCNSLN ESTTSISETL LVQFYDDLEN  60
   61 VASVIPDLVN KKRLGKDDIL LFMDWLLLKK YMLYQFISDV HNIEEGFAHL LDLLEDEFSK 120
  121 DDQDSDKYNR FSPMFDVIEE STQIKTQLEP WLTNLKELLD TSLEFNEISK DHMDTLHKII 180
  181 NSNISYCLEI QEERFASPIR HTPSFTLEQL VKLLGTHTET TEPKVPKFSP AEDILSRKFL 240
  241 NLKKNIPPIE KSLTDILPQR IVQFGHRNIT NITTLQTILQ KKYELIMKDY RFMNSEFREL 300
  301 KVELIDKRWN ILFINLNHEL LYILDEIERL QSKLLTTKYT KDITIRLERQ LERKSKTVSK 360
  361 TFNIIYRALE FSLLDAGVAS KTNELAQRWL NIKPTADKIL IKSSASNKIA TSKKKIPKPK 420
  421 SLGFGRPNSV IGTITQDFQE RVAINEGDSN KTPENSTTVA LKGKKLGKAL LQKMNIKPAT 480
  481 SPNSSNAINP FFDPESPNKG KLILSSVPPL PYDETDETTL RVSRGENEKS PDSFITSRHE 540
  541 NKVQITETPL MAKNKSVLDI EKDKWNHYRS LPSRIPIYKD KVVKVTVENT PIAKVFQTPP 600
  601 TKITTPNSQV WVPSTRRRTR LRPPTPLSQL LSPREGRLDK TPTY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..341] deduced N/A No confident structure predictions are available.
    2 View Details [342..644] MSA 1.002852 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cytoskeletal protein binding
    		•  5.50691080671938 bayes_pls_golite062009
  • actin binding
    		•  5.20020808032372 bayes_pls_golite062009
  • actin filament binding
    		•  4.56724410384698 bayes_pls_golite062009
  • tubulin binding
    		•  3.64804975825589 bayes_pls_golite062009
  • microtubule binding
    		•  3.62999428181677 bayes_pls_golite062009
  • binding
    		•  2.3468119246528 bayes_pls_golite062009
  • protein binding
    		•  2.03402581943916 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  1.75895219767628 bayes_pls_golite062009
  • integrin binding
    		•  0.634559226589946 bayes_pls_golite062009
  • structural constituent of muscle
    		•  0.502792536769221 bayes_pls_golite062009
  • SNARE binding
    		•  0.309596137075689 bayes_pls_golite062009
  • protein complex binding
    		•  0.180823251423251 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle