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Protein Overview: gi|161362117, gi...

General Information:
Name(s) found: gi|161612753 [NCBI NR]
gi|161362117 [NCBI NR]
Description(s) found:
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  • gi|161612753|ref|YP_001586718.1| hypothetical protein SPAB_00452 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] [NCBI NR]
  • gi|161362117|gb|ABX65885.1| hypothetical protein SPAB_00452 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] [NCBI NR]
    • Organism: Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7
    Length: 487 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRQLKKNLV ATLIAALALG QVAPAFADPA DTLPDMGTSA GSTLSIGQEM QMGDFYVRQL  60
   61 RGSAPLINDP LLVQYINALG MRLVSHADSV KTPFHFFLIN NDEINAFAFF GGNVVLHSAL 120
  121 FRYADNESQL ASVMAHEISH VTQRHLARAM EDQKRSAPLT WVGALGSILL AMASPQAGMA 180
  181 ALTGTLAGTR QGMISFTQQN EQEADRIGIQ VLQRAGFDPQ AMPSFLEKLL DQARYSTRPP 240
  241 EILLTHPLPE SRLADARNRA NQMRPVVVQS SADFYFAKAR ALGMYNSGRN QLTSDLLDQW 300
  301 SKGNVRQQHA AQYGRALQAM EASKYDEARK TLQPLLSAEP NNAWYLDLAT DIDLGQKRAN 360
  361 DAINRLKNAR DLRVNPVLQL NLANAYLQGG QPKAAETILN RYTFSHKDDG NGWDLLAQAE 420
  421 AALNNRDQEL AARAESYALA GRLDQAISLL SSASAQAKLG SQQQARYDAR IDQLRQLQER 480
  481 FKPYTKM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] deduced N/A No confident structure predictions are available.
    2 View Details [104..487] PSI-BLAST 35.69897 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.38600536767442 bayes_pls_golite062009
  • protein binding
    		•  0.883964976625377 bayes_pls_golite062009
  • hydrolase activity
    		•  0.391317518372402 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle