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Protein Overview: gi|165914521, gi...

General Information:
Name(s) found: gi|165937416 [NCBI NR]
gi|165914521 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|165937416|ref|ZP_02225979.1| glutamate synthase, large subunit [Yersinia pestis biovar Orientalis str. IP275] [NCBI NR]
  • gi|165914521|gb|EDR33135.1| glutamate synthase, large subunit [Yersinia pestis biovar Orientalis str. IP275] [NCBI NR]
    • Organism: Yersinia pestis biovar Orientalis str. IP275
    Length: 1538 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTITRGHWR RAEKQICRKA RVCQPTLSDI NMSFTSWFVR VSQSLGRFTD MLYDQSQERD  60
   61 NCGFGLIAHI EGEPSHKVVR TAIHALARMQ HRGAILADGK TGDGCGLLLQ KPDHFFRMVA 120
  121 EERGWRLAKN YAVGMMFLSQ DEELAKASRR IVEEELQNET LSIVGWREVP TNPDVLGEIA 180
  181 LSSLPRIEQI FVNAPAGWRS RDMERRLFVA RRRIEKRISD KDFYACSFSN LVTIYKGLCM 240
  241 PADLPRFYLD LADLRLESAI CLFHQRFSTN TVPRWPLAQP FRYLAHNGEI NTIAGNRQWA 300
  301 KARAYKFKTP LIPDLQDAAP FVNETGSDSS SLDNMLELFL SGGMDLIRAM RLLVPPAWQN 360
  361 NPDMDTDLRA FFDFNSMHME PWDGPAGIVM SDGRYAACNL DRNGLRPARY VITKDKLITC 420
  421 ASEVGIWDYQ PDEVVEKGRV GPGELMVIDT RSGKILHSAE TDNDLKSRHP YKEWMEKNVK 480
  481 RLVPFEDLPE EQVGSRQLDD SQLETYQKQF GYSNEELDQI IRVLGENGQE ATGSMGDDTP 540
  541 FAVLSSGPRI IYDYFRQQFA QVTNPPIDPL REAHVMSLAT SIGREMNVFC EAEGQAHRLS 600
  601 FKSPILLYSD FQQLTTLEGE HYRADRLDLT FNPAENDLEQ AVLSLCDEAE RKVRDGAVML 660
  661 VLSDRAIAPN RLPVPAPMAV GAIQTRLVDK SLRCDANIIV ETASARDPHH FAVLLGFGAT 720
  721 AIYPYLAYES LAKLVDSQAI DKKYRDVMLN YRNGINKGLY KIMSKMGIST VASYRCAKLF 780
  781 EAVGLHRDLS DLCFQGVVSR IGGASFSDFQ QDLQNLSKRA WLKRKPLDQG GLLKFVHNGE 840
  841 YHAYNPDVVS TLQKAVHSGE YSDYQAYAKL VNERPIATLR DLLAIKPQGT PIPVDQVEPA 900
  901 ESLFKRFDTA AMSIGALSPE AHESLAIAMN SLGGFSNSGE GGEDPARYGT NKVSRIKQVA 960
  961 SGRFGVTPAY LVNADVIQIK VAQGAKPGEG GQLPGDKVTP YIAKLRYSVP GVTLISPPPH1020
 1021 HDIYSIEDLA QLIFDLKQVN PKAMISVKLV SEPGVGTIAT GVAKAYADLI TIAGYDGGTG1080
 1081 ASPLSSVKYA GCPWELGLVE TQQALVANGL RHKIRLQVDG GLKTGVDIVK AAILGAESFG1140
 1141 FGTGPMVALG CKYLRICHLN NCATGVATQD EKLRRDHYHG LPERVVNYFH FIARETRETR1200
 1201 EIMAELGVSQ LVDLIGRTDM LLELDGISAK QNKLDLSPML KTATPHPGKA LYCTESNPPF1260
 1261 DKGLLNKELL SQAEPYIEAK QSKTFYFDIR NTDRSVGAAL SGAIATKHGD QGLATDPIKA1320
 1321 YFSGTAGQSF GVWNAGGVEL MLTGDANDYV GKGMAGGRIA VRPPVGSNFR SHEASIIGNT1380
 1381 CLYGATGGKL FAAGRAGERF AVRNSGAITV VEGIGDNGCE YMTGGIVCVL GRTGINFGAG1440
 1441 MTGGFAYVLD EDGEFRKRVN PELVEVLDVE QLAIHEEHLR GLITEHVQLT GSSRGEEILA1500
 1501 NWPEWVTKFA LVKPKSSDVK ALLGHRSRSA AELRVQAQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..1538] PSI-BLAST 1000.0 Alpha subunit of glutamate synthase, C-terminal domain; Alpha subunit of glutamate synthase, central and FMN domains; Alpha subunit of glutamate synthase, N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • glutamate synthase activity
    		•  10.2123323896554 bayes_pls_golite062009
  • glutamate synthase activity, NADH or NADPH as acceptor
    		•  9.64220719720108 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
    		•  8.40816887743017 bayes_pls_golite062009
  • glutamate synthase (NADPH) activity
    		•  7.71666213946687 bayes_pls_golite062009
  • oxidoreductase activity
    		•  2.15666801512485 bayes_pls_golite062009
  • catalytic activity
    		•  1.19663085909195 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  0.330721070169443 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.71

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle