YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|240255795, gi...

General Information:
Name(s) found: gi|5823331 [NCBI NR]
gi|240255795 [NCBI NR]
Description(s) found:
Found 5 descriptions.
SHOW ALL
  • gi|5823331|gb|AAD53104.1|AF175999_1 putative transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|240255795|ref|NP_567390.4| MYB42 (myb domain protein 42); transcription factor [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 286 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: regulation of transcription [TAS]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRQPCCDKL MVKKGPWTAE EDKKLINFIL TNGHCCWRAL PKLAGLRRCG KSCRLRWTNY  60
   61 LRPDLKRGLL SDAEEQLVID LHALLGNRWS KIAARLPGRT DNEIKNHWNT HIKKKLLKME 120
  121 IDPSTHQPLN KVFTDTNLVD KSETSSKADN VNDNKIVEID GTTTNTIDDS IITHQNSSND 180
  181 DYELLGDIIH NYGDLFNILW TNDEPPLVDD ASWSNHNVGI GGTAAVAASD KNNTAAEEDF 240
  241 PERSFEKQNG ESWMFLDYCQ EFGVEDFGFE CYHGFGQSSM KTGHKD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..204] PSI-BLAST 35.39794 c-Myb, DNA-binding domain
    2 View Details [205..286] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle