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Protein Overview: gi|218893553, gi...

General Information:
Name(s) found: gi|218893553 [NCBI NR]
gi|218773781 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|218893553|ref|YP_002442422.1| RNA polymerase factor sigma-54 [Pseudomonas aeruginosa LESB58] [NCBI NR]
  • gi|218773781|emb|CAW29595.1| RNA polymerase sigma-54 factor [Pseudomonas aeruginosa LESB58] [NCBI NR]
    • Organism: Pseudomonas aeruginosa LESB58
    Length: 497 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPSLVLKMG QQLTMTPQLQ QAIRLLQLST LDLQQEIQEA LESNPMLERQ EDGDDFDNSD  60
   61 PLADGAEQAA SAPQESPLQE SATPSVESLD DDQWSERIPS ELPVDTAWED IYQTSASSLP 120
  121 SNDDDEWDFT ARTSSGESLH SHLLWQVNLA PMSDTDRMIA VTIIDSINND GYLEESLEEI 180
  181 LAAIDPELDV ELDEVEVVLR RIQQLEPAGI GARNLRECLL LQLRQLPSTT PWLNEALRLV 240
  241 SDYLDLLGGR DYSQLMRRMK LKEDELRQVI ELIQCLHPRP GSQIESSEAE YIVPDVIVRK 300
  301 DNERWLVELN QEAMPRLRVN ATYAGMVRRA DSSADNTFMR NQLQEARWFI KSLQSRNETL 360
  361 MKVATQIVEH QRGFLDYGEE AMKPLVLHDI AEAVGMHEST ISRVTTQKYM HTPRGIFELK 420
  421 YFFSSHVSTA EGGECSSTAI RAIIKKLVAA ENAKKPLSDS KIAGLLEAQG IQVARRTVAK 480
  481 YRESLGIAPS SERKRLV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] MSA 1.15997 View MSA. No confident structure predictions are available.
    2 View Details [123..278] deduced N/A No confident structure predictions are available.
    3 View Details [279..428] Pfam 15.309804 No description for PF04552.4 was found. No confident structure predictions are available.
    4 View Details [429..497] PSI-BLAST 22.09691 Solution Structure of the C-terminal RpoN Domain of Sigma-54 from Aquifex aeolicus


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle