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Protein Overview: gi|213647818

General Information:
Name(s) found: gi|213647818 [NCBI NR]
Description(s) found:
  • gi|213647818|ref|ZP_03377871.1| putative DNA uptake protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] [NCBI NR]
    • Organism: Salmonella enterica subsp. enterica serovar Typhi str. J185
    Length: 191 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRISDAAQA HFAKLLANQK EGTQIRVFVI NPGTPNAECG VSYCPPDAVE ATDTALKFDL  60
   61 LTAYVDELSA PYLEDAEIDF VTDQLGSQLT LKAPNAKMRK VADDAPLMER VEYALQSQIN 120
  121 PQLAGHGGRV SLMEITDEGY AILQFGGGCN GCSMVDVTLK EGIEKQLLNE FPELKGVRDL 180
  181 TEHQRGEHSY Y

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] PSI-BLAST 24.69897 Crystal Structure of IscA (MERCURY DERIVATIVE)
    2 View Details [104..191] PSI-BLAST 20.39794 Solution structure of RSGI RUH-018, a NifU-like domain of hirip5 protein from mouse cDNA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 2 iron, 2 sulfur cluster binding
    		•  1.71468673917586 bayes_pls_golite062009
  • iron-sulfur cluster binding
    		•  1.33125375529348 bayes_pls_golite062009
  • metal cluster binding
    		•  1.33125375529348 bayes_pls_golite062009
  • binding
    		•  0.700615110946341 bayes_pls_golite062009
  • protein binding
    		•  0.15305983062661 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.788558668229677 bayes_pls_golite062009
  • 2 iron, 2 sulfur cluster binding
    		•  0.233615476766167 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle