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Protein Overview: gi|190407652

General Information:
Name(s) found: gi|190407652 [NCBI NR]
Description(s) found:
  • gi|190407652|gb|EDV10919.1| protein VTS1 [Saccharomyces cerevisiae RM11-1a] [NCBI NR]
    • Organism: Saccharomyces cerevisiae RM11-1a
    Length: 523 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHPYEEFPT GSKSPYNMSR GAHPGAVLLS PQSSAINKNN PGSNSGNNQG NSSVTANVLS  60
   61 PQSHSMSLND MLDQQSFMLD TAGTRAQPLQ QQQQQQQQQQ QASLPSLNIQ TVSSTAAGSA 120
  121 IVSPMMQSPK ALQSTLSSTS MYLDSFQRSP NNILGIPSQS GSIPLPQSRQ SQQQSQSQKN 180
  181 DPNMGTNFSQ DINQLCSWIS MLNSSQQNTV MDNILSILND DVLKYTKLKI ETLTNTPFIS 240
  241 PPLPAIASPI PNRDDTQILN IDSVFSSSPI TNDPENTDNL LYQNWSPQPH SIPISQPIYD 300
  301 NITDASQRSK SAEPHVNSSP NLIPVQKQFN NGNSTKYKKL PSENPNYLSH SLSSSHSFFQ 360
  361 PKKRSNMGNE YNSHHHHSLH HPLHNTTSYF SNTSRPSGTD LNKSNQNVFN NTITHPNAGP 420
  421 TSATSTSTSS NGNTPLSSNS SMNPKSLTDP KLLKNIPMWL KSLRLHKYSD ALSGTPWIEL 480
  481 IYLDDETLEK KGVLALGARR KLLKAFGIVI DYKERDLIDR SAY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..416] MSA 21.281997 View MSA. No confident structure predictions are available.
    2 View Details [417..523] MSA 14.158997 View MSA. No confident structure predictions are available.
    3 View Details [309..407] MSA 2.14599 View MSA. No confident structure predictions are available.
    4 View Details [408..523] PSI-BLAST 28.0 RNA recognition by the Vts1 SAM domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle