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Protein Overview: gi|166206878, gi...

General Information:
Name(s) found: gi|166212132 [NCBI NR]
gi|166206878 [NCBI NR]
Description(s) found:
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  • gi|166212132|ref|ZP_02238167.1| 2-isopropylmalate synthase [Yersinia pestis biovar Antiqua str. B42003004] [NCBI NR]
  • gi|166206878|gb|EDR51358.1| 2-isopropylmalate synthase [Yersinia pestis biovar Antiqua str. B42003004] [NCBI NR]
    • Organism: Yersinia pestis biovar Antiqua str. B42003004
    Length: 520 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQQVIIFDT TLRDGEQALQ ASLSVKEKLQ IALALERMGV DIMEVGFPVS SPGDFESVRT  60
   61 IAQQVKNSRV CALARCVDKD IDVAAEALRI AEAFRIHVFL ATSTLHIESK LKRSFDDVLA 120
  121 MAVHSVKRAR NYTDDVEFSC EDAGRTPIDN LCRVVEAAIT AGATTINIPD TVGYTTPYQF 180
  181 GGIITDLYER VPNIDKAIIS VHCHDDLGMS VANSITAVQA GARQVEGTIN GLGERAGNCS 240
  241 LEEVIMAIKV RHEMLGVHTN INHQEIYRTS QLVSKICNMP IPGNKAIVGS NAFAHSSGIH 300
  301 QDGVLKNREN YEIMTPESIG LKEVQLNLTS RSGRAAVKHR MEEMGYQDKD YNLDSLYDAF 360
  361 LKLADKKGQV FDYDLEALAF INKQQEEPEY YRLDYFSVQS GSSVMATASV KLVCGEEIKS 420
  421 EAATGNGPVD AVYQAINRIT DYPIELVKYQ LSAKGQGKDA LGQVDIVVDH KGRRFHGVGL 480
  481 ATDIVESSAK ALVHVLNNIW RAHQVEKEKQ RLQQNNQEMV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..520] PSI-BLAST 111.0 Crystal Structure of LeuA from Mycobacterium tuberculosis

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 2-isopropylmalate synthase activity
    		•  3.07962096729216 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  2.96685031644778 bayes_pls_golite062009
  • catalytic activity
    		•  2.67031204377352 bayes_pls_golite062009
  • porphobilinogen synthase activity
    		•  1.24455949903754 bayes_pls_golite062009
  • transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
    		•  1.14592921123611 bayes_pls_golite062009
  • fructose-bisphosphate aldolase activity
    		•  0.877814788710295 bayes_pls_golite062009
  • lyase activity
    		•  0.740424046054758 bayes_pls_golite062009
  • binding
    		•  0.584966797881465 bayes_pls_golite062009
  • transaldolase activity
    		•  0.468395717570545 bayes_pls_golite062009
  • transferase activity
    		•  0.464721888799972 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  0.421097563118217 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  0.30550563321981 bayes_pls_golite062009
  • ligase activity, forming carbon-carbon bonds
    		•  0.13873587393116 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle