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Protein Overview: gi|218703693, gi...

General Information:
Name(s) found: gi|218703693 [NCBI NR]
gi|218430790 [NCBI NR]
Description(s) found:
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  • gi|218703693|ref|YP_002411212.1| nucleoside channel, receptor of phage T6 and colicin K [Escherichia coli UMN026] [NCBI NR]
  • gi|218430790|emb|CAR11664.1| nucleoside channel, receptor of phage T6 and colicin K [Escherichia coli UMN026] [NCBI NR]
    • Organism: Escherichia coli UMN026
    Length: 294 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTLLAAGA VLALSSSFTV NAAENDKPQY LSDWWHQSVN VVGSYHTRFG PQIRNDTYLE  60
   61 YEAFAKKDWF DFYGYADAPV FFGGNSDAKG IWNHGSPLFM EIEPRFSIDK LTNTDLSFGP 120
  121 FKEWYFANNY IYDMGRNKDG RQSTWYMGLG TDIDTGLPMS LSMNVYAKYQ WQNYGAANEN 180
  181 EWDGYRFKIK YFVPITDLWG GQLSYIGFTN FDWGSDLGDD SGNAINGIKT RTNNSIASSH 240
  241 ILALNYDHWH YSVVARYWHD GGQWNDDAEL NFGNGNFNVR STGWGGYLVV GYNF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..294] PSI-BLAST 73.0 Tsx structure complexed with thymidine

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nucleoside transmembrane transporter activity
    		•  6.37824101433373 bayes_pls_golite062009
  • nucleobase, nucleoside, nucleotide and nucleic acid transmembrane transporter activity
    		•  3.19177305556798 bayes_pls_golite062009
  • transporter activity
    		•  1.0103803313803 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.86669497658554 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.56992532298404 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.4344928497229 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle