YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|170024689, gi...

General Information:
Name(s) found: gi|170024689 [NCBI NR]
gi|169751223 [NCBI NR]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • gi|170024689|ref|YP_001721194.1| PTS system mannose/fructose/sorbose family IIB subunit [Yersinia pseudotuberculosis YPIII] [NCBI NR]
  • gi|169751223|gb|ACA68741.1| PTS system, mannose/fructose/sorbose family, IIB subunit [Yersinia pseudotuberculosis YPIII] [NCBI NR]
    • Organism: Yersinia pseudotuberculosis YPIII
    Length: 324 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIAIIIGTH GAAAEQLLKT AEMILGEQSN VAYIDFVPGE NAETLIEKYN DRLTGLDTSK  60
   61 GVLFLVDTWG GSPFNAASRI AIDKENYEVV TGVNIPMLAE TFMARDDEPS FAELVAVAVE 120
  121 TGREGVKALK APDVKSDKPE TQPAAPVPTA KAPAVALGPN DHMKIGLARI DDRLIHGQVA 180
  181 TRWTKETNVN RIIVVSDEVA ADKMRKTLLT QVAPPGVTAH VVDVEKAIRV YNNPKYANDR 240
  241 VMLLFTNPTD VVRLVEGGVD IKSVNIGGMA FRQGKTQVNN AVSIDEKDIE AFNKLNARGI 300
  301 ELEVRKVSSD SRLKMMDLIS KLNK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..147] PSI-BLAST 37.0 Complex of enzyme IIAmannose and the histidine-containing phosphocarrier protein HPr from escherichia coli nmr, restrained regularized mean structure
    2 View Details [148..324] PSI-BLAST 52.69897 Sorbose permease subunit IIb , EIIb-sor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • carbohydrate transmembrane transporter activity
    		•  1.41958257592479 bayes_pls_golite062009
  • binding
    		•  1.3313872030407 bayes_pls_golite062009
  • protein binding
    		•  0.504276536503861 bayes_pls_golite062009
  • transporter activity
    		•  0.433212475678148 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.21078048070603 bayes_pls_golite062009
    2
    Term Confidence Notes
  • carbohydrate transmembrane transporter activity
    		•  3.89825676747483 bayes_pls_golite062009
  • transporter activity
    		•  2.00960396164678 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.86135605657276 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.70618312780208 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.5973591090727 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.15285098263315 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.669347420921443 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.643818947881128 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle