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Protein Overview: CINAL_ECODH

General Information:
Name(s) found: CINAL_ECODH [Swiss-Prot]
Description(s) found:
Found 4 descriptions.
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  • CinA-like protein OS=Escherichia coli (strain K12 / DH10B) GN=ECDH10B_2409 PE=3 SV=1 [Swiss-Prot]
    • Organism: Escherichia coli str. K-12 substr. DH10B
    Length: 400 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKVEMLSTG DEVLHGQIVD TNAAWLADFF FHQGLPLSRR NTVGDNLDDL VTILRERSQH  60
   61 ADVLIVNGGL GPTSDDLSAL AAATAKGEGL VLHEAWLKEM ERYFHERGRV MAPSNRKQAE 120
  121 LPASAEFINN PVGTACGFAV QLNRCLMFFT PGVPSEFKVM VEHEILPRLR ERFSLPQPPV 180
  181 CLRLTTFGRS ESDLAQSLDT LQLPPGVTMG YRSSMPIIEL KLTGPASEQQ AMEKLWLDVK 240
  241 RVAGQSVIFE GTEGLPAQIS RELQNRQFSL TLSEQFTGGL LALQLSRAGA PLLACEVVPS 300
  301 QEETLAQTAH WITERRANHF AGLALAVSGF ENEHLNFALA TPDGTFALRV RFSTTRYSLA 360
  361 IRQEVCAMMA LNMLRRWLNG QDIASEHGWI EVVESMTLSV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..250] PSI-BLAST 36.69897 No description for 2nqqA was found.
    2 View Details [251..400] PSI-BLAST 16.0 The crystal structure of competence/damage inducible protein CihA from Agrobacterium tumefaciens

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.9303555688427 bayes_pls_golite062009
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.666293440418936 bayes_pls_golite062009
  • binding
    		•  0.169690822508591 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle