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Protein Overview: gi|218554350, gi...

General Information:
Name(s) found: gi|218554350 [NCBI NR]
gi|218361118 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|218554350|ref|YP_002387263.1| scaffolding protein for murein synthesizing machinery [Escherichia coli IAI1] [NCBI NR]
  • gi|218361118|emb|CAQ98701.1| scaffolding protein for murein synthesizing machinery [Escherichia coli IAI1] [NCBI NR]
    • Organism: Escherichia coli IAI1
    Length: 248 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKLKLLALG VLIATSAGVA HAEGKFSLGA GVGVVEHPYK DYDTDVYPVP VINYEGDNFW  60
   61 FRGLGGGYYL WNDATDKLSI TAYWSPLYFK AKDSGDHQMR HLDDRKSTMM AGLSYAHFTQ 120
  121 YGYLRTTLAG DTLDNSNGIV WDMAWLYRYT NGGLTVTPGI GVQWNSENQN EYYYGVSRKE 180
  181 SARSGLRGYN PNDSWSPYLE LSASYNFLGD WSVYGTARYT RLSDEVTDSP MVDKSWTGLI 240
  241 STGITYKF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..248] PSI-BLAST 20.09691 Outer membrane protein A (OMPA) transmembrane domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • porin activity
    		•  4.1108495362755 bayes_pls_golite062009
  • wide pore channel activity
    		•  3.18531781599537 bayes_pls_golite062009
  • binding
    		•  0.660276808926851 bayes_pls_golite062009
  • protein binding
    		•  0.27305872597094 bayes_pls_golite062009
  • receptor activity
    		•  0.091429531336731 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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