YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|165924385, gi...

General Information:
Name(s) found: gi|165924385 [NCBI NR]
gi|165923445 [NCBI NR]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • gi|165924385|ref|ZP_02220217.1| imidazole glycerol phosphate synthase, glutamine amidotransferase subunit [Yersinia pestis biovar Orientalis str. F1991016] [NCBI NR]
  • gi|165923445|gb|EDR40577.1| imidazole glycerol phosphate synthase, glutamine amidotransferase subunit [Yersinia pestis biovar Orientalis str. F1991016] [NCBI NR]
    • Organism: Yersinia pestis biovar Orientalis str. F1991016
    Length: 196 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVVILDTGC ANLSSVTYAV QRLGYTPVIS RDPAVVLRAD KLFMPGVGTA HAAMEQLRQR  60
   61 ELIELIKSCT QPVLGICLGM QLLATSSEES GGITTLGMID APVKKMTDFG LPLPHMGWNQ 120
  121 ITAQAGNHLF RGIPDGTYFY FVHGYAMPIC PNTIAQTNYG EPFTAAVEKD NFFGVQFHPE 180
  181 RSGAAGAQLM KNFLEM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..196] PSI-BLAST 33.154902 Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF; GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • imidazoleglycerol-phosphate synthase activity
    		•  8.34101262147614 bayes_pls_golite062009
  • ligase activity
    		•  1.70348758031146 bayes_pls_golite062009
  • catalytic activity
    		•  1.30391542469987 bayes_pls_golite062009
  • transferase activity, transferring pentosyl groups
    		•  0.643287540591989 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  0.628648036096965 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle