YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|16975304, gi|...

General Information:
Name(s) found: gi|1942667 [NCBI NR]
gi|1942666 [NCBI NR]
gi|16975304 [NCBI NR]
gi|16975303 [NCBI NR]
gi|1310998 [NCBI NR]
gi|1310997 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|1942667|pdb|1EXT|B Chain B, Extracellular Domain Of The 55kda Tumor Necrosis Factor Receptor. Crystallized At Ph3.7 In P 21 21 21. [NCBI NR]
  • gi|1942666|pdb|1EXT|A Chain A, Extracellular Domain Of The 55kda Tumor Necrosis Factor Receptor. Crystallized At Ph3.7 In P 21 21 21. [NCBI NR]
  • gi|16975304|pdb|1FT4|B Chain B, Photochemically-Enhanced Binding Of Small Molecules To The Tumor Necrosis Factor Receptor-1 [NCBI NR]
  • gi|16975303|pdb|1FT4|A Chain A, Photochemically-Enhanced Binding Of Small Molecules To The Tumor Necrosis Factor Receptor-1 [NCBI NR]
  • gi|1310998|pdb|1NCF|B Chain B, A New Paradigm For Tumor Necrosis Factor Signalling [NCBI NR]
  • gi|1310997|pdb|1NCF|A Chain A, A New Paradigm For Tumor Necrosis Factor Signalling [NCBI NR]
  • Chain B, Photochemically-Enhanced Binding Of Small Molecules To The Tumor Necrosis Factor Receptor-1gi|16975303|pdb|1FT4|A Chain A, Photochemically-Enhanced Binding Of Small Molecules To The Tumor Necrosis Factor Receptor-1gi|1942667|pdb|1EXT|B Chain B, [nrdb_11152004_Chlamydomonas]
  • Chain B, Photochemically-Enhanced Binding Of Small Molecules To The Tumor Necrosis Factor Receptor-1 [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Chain A, Photochemically-Enhanced Binding Of Small Molecules To The Tumor Necrosis Factor Receptor-1 [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Chain B, Extracellular Domain Of The 55kda Tumor Necrosis Factor Receptor. Crystallized At Ph3.7 In P 21 21 21. [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Chain A, Extracellular Domain Of The 55kda Tumor Necrosis Factor Receptor. Crystallized At Ph3.7 In P 21 21 21. [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Chain B, A New Paradigm For Tumor Necrosis Factor Signalling [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Chain A, A New Paradigm For Tumor Necrosis Factor Signalling [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Chain A, Extracellular Domain Of The 55kda Tumor Necrosis Factor Receptor. Crystallized At Ph3.7 In P 21 21 21. [nr-271106-contam.fasta]
  • Chain B, Binding Protein, Cytokine Mol_id: 1; Molecule: Tumor Necrosis Factor Receptor; Chain: A, B; Domain: 55 Kd Extracellular Domain (Met Plus Residues 12 - 272; Synonym: Type I Receptor, Stnfr1; Engineered: Yes; Mutation: R11m; Other_details: The Cons [nr-271106-contam.fasta]
  • Chain A, Binding Protein, Cytokine Mol_id: 1; Molecule: Tumor Necrosis Factor Receptor; Chain: A, B; Domain: 55 Kd Extracellular Domain (Met Plus Residues 12 - 272; Synonym: Type I Receptor, Stnfr1; Engineered: Yes; Mutation: R11m; Other_details: The Cons [nr-271106-contam.fasta]
  • Chain B, Extracellular Domain Of The 55kda Tumor Necrosis Factor Receptor. Crystallized At Ph3.7 In P 21 21 21. [nr-271106-contam.fasta]
    • Organism: Homo sapiens
    Length: 162 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSVCPQGKY IHPQNNSICC TKCHKGTYLY NDCPGPGQDT DCRECESGSF TASENHLRHC  60
   61 LSCSKCRKEM GQVEISSCTV DRDTVCGCRK NQYRHYWSEN LFQCFNCSLC LNGTVHLSCQ 120
  121 EKQNTVCTCH AGFFLRENEC VSCSNCKKSL ECTKLCLPQI EN

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|16975304, gi|... gi|219109210, gi...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..162] PSI-BLAST 20.221849 Tumor necrosis factor (TNF) receptor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.643682637675745 bayes_pls_golite062009
  • protein binding
    		•  0.39277228108791 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle