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Protein Overview: gi|170025987, gi...

General Information:
Name(s) found: gi|170025987 [NCBI NR]
gi|169752521 [NCBI NR]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • gi|170025987|ref|YP_001722492.1| hypothetical protein YPK_3772 [Yersinia pseudotuberculosis YPIII] [NCBI NR]
  • gi|169752521|gb|ACA70039.1| protein of unknown function DUF21 [Yersinia pseudotuberculosis YPIII] [NCBI NR]
    • Organism: Yersinia pseudotuberculosis YPIII
    Length: 443 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNSILLILF LIAVSAFFSL SEISLAASRK IKLKLLADEG DTNALRVLKL QETPGMFFTV  60
   61 VQIGLNAVAI LGGIVGDAAF SPSFKLVFER FMAPELADQA SFVCSFVLVT SLFILFADLT 120
  121 PKRIGMISPE AVAVRIVNPM RFCLMIFRPL VWFFNGMANL IFRLFKLPMV RNDDITSDDI 180
  181 YAVVEAGALA GVLRKQEHEL IENVFELESR TVPSSMTSRE NVIYFDLRES EDSIKDKIST 240
  241 HPHSKFLVCD GHIDQVVGYV DSKDLLNRVL GNQSLVLSSG VQIRSALIVP DTLTLSEALE 300
  301 SFKTAGEDFA VILNEYALVV GIITLNDVMT TLMGDLVGQG QEEQIVARDE NSWLIEGGTP 360
  361 IEDVMRVLHI DDFPQSGNYE TIGGFMMYML RKIPKRTDFV KYAGYKFEVV DIDSYKIDQL 420
  421 LVTRLSDQPA PILPKAPHES SDA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..350] PSI-BLAST 12.522879 No description for 2ooxG was found.
    2 View Details [351..443] PSI-BLAST 14.39794 No description for 2p4pA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • magnesium ion transmembrane transporter activity
    		•  4.09048700098247 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  3.20360029620216 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.84728629370153 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  2.83549234777732 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.62479915553705 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  2.22305253722734 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  2.09656284183303 bayes_pls_golite062009
  • transporter activity
    		•  1.41639006729672 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  1.21441469552217 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.13866512878605 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.917464827903503 bayes_pls_golite062009
  • binding
    		•  0.57037105268889 bayes_pls_golite062009
  • catalytic activity
    		•  0.074501016141151 bayes_pls_golite062009
  • protein binding
    		•  0.0511755694922399 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle