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Protein Overview: gi|218434944, gi...

General Information:
Name(s) found: gi|218707847 [NCBI NR]
gi|218434944 [NCBI NR]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • gi|218707847|ref|YP_002415366.1| anaerobic ribonucleoside triphosphate reductase [Escherichia coli UMN026] [NCBI NR]
  • gi|218434944|emb|CAR15883.1| anaerobic ribonucleoside-triphosphate reductase [Escherichia coli UMN026] [NCBI NR]
    • Organism: Escherichia coli UMN026
    Length: 712 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPHVMKRDG CKVPFKSERI KEAILRAAKA AEVDDADYCA TVAAVVSEQM QGRNQVDINE  60
   61 IQTAVENQLM SGPYKQLARA YIEYRHDRDI EREKRGRLNQ EIRGLVEQTN ASLLNENANK 120
  121 DSKVIPTQRD LLAGIVAKHY ARQHLLPRDV VQAHERGDIH YHDLDYSPFF PMFNCMLIDL 180
  181 KGMLTQGFKM GNAEIEPPKS ISTATAVTAQ IIAQVASHIY GGTTINRIDE VLAPFVTASY 240
  241 NKHRKTAEEW NIPDAEGYAN SRTIKECYDA FQSLEYEVNT LHTANGQTPF VTFGFGLGTS 300
  301 WESRLIQESI LRNRIAGLGK NRKTAVFPKL VFAIRDGLNH KKGDPNYDIK QLALECASKR 360
  361 MYPDILNYDQ VVKVTGSFKT PMGCRSFLGV WENENGEQIH DGRNNLGVIS LNLPRIALEA 420
  421 KGDEATFWKL LDERLVLARK ALMTRIARLE GVKARVAPIL YMEGACGVRL NADDDVSEIF 480
  481 KNGRASISLG YIGIHETINA LFGGEHVYDN EQLRAKGIAI VERLRQAVDQ WKEETGYGFS 540
  541 LYSTPSENLC DRFCRLDTAE FGVVPGVTDK GYYTNSFHLD VEKKVNPYDK IDFEAPYPPL 600
  601 ANGGFICYGE YPNIQHNLKA LEDVWDYSYQ HVPYYGTNTP IDECYECGFT GEFECTSKGF 660
  661 TCPKCGNHDA SRVSVTRRVC GYLGSPDARP FNAGKQEEVK RRVKHLGNGQ IG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..110] PSI-BLAST 16.0 Structures of Yeast Ribonucloetide Reductase I
    2 View Details [111..712] PSI-BLAST 1000.0 Class III anaerobic ribonucleotide reductase NRDD subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • ribonucleoside-triphosphate reductase activity
    		•  9.3477327019931 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
    		•  8.4227686174128 bayes_pls_golite062009
  • ribonucleoside-diphosphate reductase activity
    		•  7.9433005176339 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH or CH2 groups
    		•  7.80351268764356 bayes_pls_golite062009
  • class III ribonucleotide reductase activity
    		•  5.84425109538191 bayes_pls_golite062009
  • CTP reductase activity
    		•  5.84425109538191 bayes_pls_golite062009
  • class I ribonucleotide reductase activity
    		•  3.5217325854654 bayes_pls_golite062009
  • catalytic activity
    		•  1.95058695475279 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.610428948300511 bayes_pls_golite062009
  • binding
    		•  0.314904881128799 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle