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Protein Overview: UBID_PSEA8

General Information:
Name(s) found: UBID_PSEA8 [Swiss-Prot]
Description(s) found:
Found 4 descriptions.
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  • 3-octaprenyl-4-hydroxybenzoate carboxy-lyase OS=Pseudomonas aeruginosa (strain LESB58) GN=ubiD PE=3 SV=1 [Swiss-Prot]
    • Organism: Pseudomonas aeruginosa LESB58
    Length: 488 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFKDLRDFI AQLEQRGALK RIQVPISPVL EMTEVCDRTL RAKGPALLFE KPTGFDMPVL  60
   61 GNLFGTPERV ALGMGAEDVG ALREIGKLLA QLKEPEPPKG LKDAWAKLPM YRKVLSMAPK 120
  121 VLKDAPCQEV VEEGEDVDLG RLPVQTCWPG DVGPLITWGL TVTRGPNKER QNLGIYRQQV 180
  181 IGRNKVIMRW LSHRGGALDY REWCQKHPGQ PYPVAVALGA DPATILGAVT PVPDTLSEYA 240
  241 FAGLLRGHRT ELVKCRGSDL QVPASAEIVL EGVIHPGEMA DEGPYGDHTG YYNEVDRFPV 300
  301 FTVERVTRRQ KPIYHSTYTG RPPDEPAILG VALNEVFVPI LQKQFPEIVD FYLPPEGCSY 360
  361 RMAVVTMKKQ YPGHAKRVML GVWSFLRQFM YTKFVIVTDD DIDARDWNDV IWAITTRMDP 420
  421 KRDTVMIDNT PIDYLDFASP VSGLGSKMGL DATHKWPGET SREWGRAIVK DEAVTRRIDA 480
  481 LWSSLGID

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..488] PSI-BLAST 1000.0 No description for 2idbA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
    		•  0.806130882178534 bayes_pls_golite062009
  • catalytic activity
    		•  0.660906721832294 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle