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Protein Overview: CMOA_PHOPR

General Information:
Name(s) found: CMOA_PHOPR [Swiss-Prot]
Description(s) found:
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  • gi|81400019|sp|Q6LT55.1|CMOA_PHOPR RecName: Full=tRNA (cmo5U34)-methyltransferase [NCBI NR]
  • tRNA (cmo5U34)-methyltransferase OS=Photobacterium profundum GN=cmoA PE=3 SV=1 [Swiss-Prot]
    • Organism: Photobacterium profundum
    Length: 244 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMAGQDNIF AAPIEKLGDF TFDQKVAEVF PDMIQRSVPG YSNIISAIGM LAERFAKPHS  60
   61 KIYDLGCSLG AATLSMRRSI QQEGCEIIAV DNSAAMVERC RLHIDAYRSD TPVQVVEADI 120
  121 RNIDIADASV VVLNFTLQFL VPEDRQMLLE KIYAGLRPGG ILILSEKYIF DDEQAHELLI 180
  181 NLHHDFKRAN GYSELEISQK RSAIENVMRP DSIDTHKKRL TEIGFSSTEV WFQCFNFGSM 240
  241 FAIK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..244] PSI-BLAST 42.0 Hypothetical protein HI0319 (YecO)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.25333584501255 bayes_pls_golite062009
  • transferase activity
    		•  0.999964866871553 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.558878917426836 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.557560946446304 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  0.0605581837493382 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle