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Protein Overview: gi|25090173, gi|...

General Information:
Name(s) found: gi|25090173 [NCBI NR]
gi|18390535 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|25090173|gb|AAN72246.1| At1g05520/T25N20_16 [Arabidopsis thaliana] [NCBI NR]
  • gi|18390535|ref|NP_563741.1| transport protein, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 783 amino acids

    Gene Ontology:
    Cellular Component: COPII vesicle coat [IEA]
    Biological Process: transport [ISS]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]
    transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEMASMDPE GIDGVRMTWN VWPRTKVEAS KCVIPVAACI SPIRYHRDIP SVEYAPLRCR  60
   61 ICTAALNPFA RVDFLAKIWI CPICFQRNHF PPHYHVMSET NVPCELYPQY TTVEYTLPNP 120
  121 SQPTGVGNFD QTGAVSGQPS PSVFVFVLDT CMIEEEFGYA KSALKQAIGL LPENALVGFV 180
  181 SFGTQAHVHE LGFSDLTKVY VFRGDKEISK DQVLEQLGLG ASGRRNPVGG FPMGRDNSAN 240
  241 FGYSGVNRFL LPASDCEFTI DLLLEELQTD QWPVQAGRRQ SRCTGVAISV ATGLLGACFP 300
  301 GTGARIVALI GGPCSEGPGT IVSKDLSEPL RSHKDLDKDA APFYKKAEKF YDALANQLVN 360
  361 QGHVLDLFAS ALDQVGVAEM KAAVERTGGL VVLSESFGHS VFKDSFKRVF EDGEESLGLC 420
  421 FNGTLEICCS KDIKIQGIIG PCASLQKKGP SVADTVIGEG NTTQWKMCGL DKRTCLTVFF 480
  481 DLSSSDQSSA PGGVNNQLYL QFMTSYQNSK GKTLQRVTTV TRQWVDTGLS TEELVQGFDQ 540
  541 ETAAVVVARL ASLKMETEEG FDATRWLDRN LIRLCSKFGD YRKDDPASFT LNPNFSLFPQ 600
  601 FTFNLRRSQF VQVFNNSPDE TAYNRMLLNR ENISNAAVMI QPSLTTYSFN SLPQPALLDV 660
  661 ASIGADRILL LDSYISVVVF HGMTIAQWRN LGYQNQPEHQ AFAQLLEAPQ EDAQMIIRDR 720
  721 FPVPRLVVCD QHGSQARFLL AKLNPSATYN NASEMNAGSD IIFTDDVSLQ VFFQHLQKLA 780
  781 VQS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..783] PSI-BLAST 1000.0 No description for 2nupA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle