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Protein Overview: gi|5758933, gi|1...

General Information:
Name(s) found: gi|5758933 [NCBI NR]
gi|18415098 [NCBI NR]
gi|115646869 [NCBI NR]
Description(s) found:
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  • gi|5758933|gb|AAD50900.1|AF169596_1 negative regulator of systemic acquired resistance SNI1 [Arabidopsis thaliana] [NCBI NR]
  • gi|18415098|ref|NP_567557.1| SNI1; transcription repressor [Arabidopsis thaliana] [NCBI NR]
  • gi|115646869|gb|ABJ17147.1| At4g18470 [Arabidopsis thaliana] [NCBI NR]
  • negative regulator of systemic acquired resistance SNI1 [Arabidopsis thaliana]gi|18415098|ref|NP_567557.1| negative regulator of systemic acquired resistance (SNI1) [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Negative regulator of systemic acquired resistance (SNI1) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: SNI1 | SNI1 (SUPPRESSOR OF NPR1-1, INDUCIBLE 1) | chr4:10192995-10195522 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • SNI1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • negative regulator of systemic acquired resistance SNI1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At4g18470 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: SNI1 | negative regulator of systemic acquired resistance (SNI1) | chr4:10192984-10195511 FORWARD LENGTH=432 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At4g18470 OS=Arabidopsis thaliana GN=SNI1 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 432 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: systemic acquired resistance [TAS]
    histone modification [IMP]
    somatic cell DNA recombination [IMP]
    negative regulation of systemic acquired resistance [IMP]
    Molecular Function: transcription repressor activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKETKGNNN TSRVMSGYGG SLEANTLAMI DSTGAKDSRD ANEDRLQYLE AVRAASLVPE  60
   61 NGIPPTNKMY QAIFRILRFG KTLELITASF QLLTQLHQRF PWVYVSDSAD QLDIVDEAWS 120
  121 PFNFGSDVDS DEKDLSVRSL FLQQLIQNMN KRVNESEESD LKILGNMFLF KYLAHVLKLD 180
  181 FTPRNQVYEE TMNWSLLKES FLNLLLASRK VNFKLLMKDY LSTMCASIDA DEKSISLVEL 240
  241 HKDMLTAMKE LLVMIMELDT SKKKADLEGI TSRGDGVRTP AMEIILDELT YDGYLLSKFL 300
  301 QVFDDPKWKL EIVLQYLTKY IPKPVVRTRR TTVPQAEDSK TLNGILKTFS NGTNPKNITK 360
  361 KIGPDIVQIL IGHAFLARLT FSDPHEGDSI SEICSSIISA FTSLKRVDQK IEILPFGKEV 420
  421 LFTAGMVLKA KA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..130] deduced N/A No confident structure predictions are available.
    2 View Details [131..332] deduced N/A No confident structure predictions are available.
    3 View Details [333..432] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle