Protein Overview: gi|3172136

General Information:
Name(s) found:	gi\|3172136 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|3172136\|gb\|AAC18417.1\| RNA polymerase II largest subunit [Acanthamoeba castellanii] [NCBI NR] RNA polymerase II largest subunit [Acanthamoeba castellanii] [nrdb_11152004_Chlamydomonas]
Organism:	Acanthamoeba castellanii
Length:	1569 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ECPGHFGHLE LAKPVFNIGF LTTVLKILRS VCFHCSKLLV DEAQELKNVK HRFARVYTLA  60
   61 KTKTICEGGE DTGTDKEQGD STDPKEKKEV KKSHGGCGNF QPKITKDGMK IMAEFKNVGD 120
  121 DPNVEKKQLL TAEKVHAILK LISDEDCLAM GFDPKWARPD WMIITIMPIP PPPVRPSITM 180
  181 DSAARGEDDL THKLADIIKA NANLRKQEAN GAAAHIISQF QELLQYHIAT FIDNEIPGFP 240
  241 QATVRSGSRA LKSLKQRLRG KEGRIRGNLM GKRVDFSART VITGDPNISI DEVGVPRSIA 300
  301 LNLTYPELVT PFNIDKMYEL IRNGPTEHPG AKYIIRDDGQ RLDLRFARKA SDLHLEYGYK 360
  361 VERHIQDGDV IIFNRQPSLH KMSMMGHKVK IMPYSTFRLN LSVTTPYNAD FDGDEMNMHV 420
  421 PQTPGARAEV IELMMVPKQI VTAQSNKPVI GIVQDTLLGG CLLTQRDTFI EKDVMMNILM 480
  481 WLESWDGTVP TPTILKPKQL WTGKQVFSLI IPRNTNFVNA DDEEPDMSFT DNKVLIEEGE 540
  541 LVSGILNKKT LGTSHKSLVH VIWNEHGSEV CKHFLNQVQH VVNYWLLHHG FSVGVGDTIA 600
  601 DEETLAKITQ TIRKAKDEVK ERQLEAQQGQ LERQPGRTMM ESFEFVINQI LNKARDDAGN 660
  661 SAQKSLRRSN NFKAMVIAGS KGSAINISQV LACVGQQNVE GKRIPFCFRD RTLPHFVKDD 720
  721 FGPESRGFVE NSYLRGLTPQ EFFFHAMGGR EGLIDTAVKT AETGYIQRRL VKALEDVMVK 780
  781 YDYTVRNSLG DVIQFLYGED GMDGQTVETQ PLDALKMSNE GVVLKYQHDY DSPSWGEGWI 840
  841 DPVIADAIAN SPEKKRILDK EFEQILADRR LLREKIFLAG DDRWPLPVNL TRMILNAQKI 900
  901 FHLGPKKVSD LDPCQIVEDL GNLIERLVVI PGQDDISKEA QANAILLFSI LLRFTLASRR 960
  961 VLQEYRLDQI SWDWLLGEIT DRFYKSLCDP GEMIGALAAQ SIGEPATQMT LNTFHFAGVS1020
 1021 AKNVTLGVPR LKELINIAKT IKTPSLTVYL EPHCSRDHEA AKNVQCSLQH TTLRDVTAAT1080
 1081 EIFYDPDPVN TVITEDQDFV RAYFLMPEEE INTSNLSPWL LRIELNREKM TDTKLSMQEI1140
 1141 AERIHADFGG DLNCIYNDDN ADKLILRIRI NNDEENKAPD QEGSVGDDDV FLKQIESNML1200
 1201 TEMDLKGIEG IKKVFIREDK NKVAIDARGE YTKANELVLD TEGTNLLAVM SHPDVDHTRT1260
 1261 TSNNIIETIE VLGIEAVRNA LLRELRNVIS FDGAYVNYRH LAILADVMTY RGHLMAITRH1320
 1321 GINRVETGCL MRCSFEETAD ILLEAATFSE LDPLSGVSEN ILLGQLPPLG TGCFDLFLNE1380
 1381 SKLKDAIEPP AGGEATAMFY EPGATSPGSA TPYMGSDERY LPNFFHTTPM YRMSPGATPA1440
 1441 ASYSPYVDFG EFSPGRGSFS PSPSSPSYSP ASPGYSPAGA GYSPSSPGYS PSSPGYSPSS1500
 1501 PGYSPASPGY SPSSPAYSPT SPKYSPASPS YSPTSPAYSP TSPSYSPSSP SYSPTSPSYS1560
 1561 PTSPSYSPS

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: gi|3172136

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: