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Protein Overview: TPR1_ARATH

General Information:
Name(s) found: TPR1_ARATH [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
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  • Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 PE=1 SV=3 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1120 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDA]
    Biological Process: primary shoot apical meristem specification [IGI]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF  60
   61 TKVDDNRYSM KIFFEIRKQK YLEALDRHDR PKAVDILVKD LKVFSTFNEE LFKEITQLLT 120
  121 LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRTSR LRTLINQSLN 180
  181 WQHQLCKNPR PNPDIKTLFV DHSCRLPNDA RAPSPVNNPL LGSLPKAEGF PPLGAHGPFQ 240
  241 PTPSPVPTPL AGWMSSPSSV PHPAVSGGPI ALGAPSIQAA LKHPRTPPSN SAVDYPSGDS 300
  301 DHVSKRTRPM GISDEVSLGV NMLPMTFPGQ AHGHNQTFKA PDDLPKTVAR TLSQGSSPMS 360
  361 MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD LSKCSMPLQA ALVKEPVVSV 420
  421 NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDIAF STPNKQLCVT 480
  481 TCGDDKTIKV WDAATGVKRY TFEGHEAPVY SICPHYKENI QFIFSTALDG KIKAWLYDNM 540
  541 GSRVDYEAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL 600
  601 GVVQFDTTKN RYLAAGDDFS IKFWDMDTIQ LLTAIDADGG LQASPRIRFN KEGSLLAVSA 660
  661 NDNMIKVMAN SDGLRLLHTV ENLSSESSKP AINSIPMVER PASVVSIPGM NGDSRNMVDV 720
  721 KPVITEESND KSKVWKLTEV GEPSQCRSLR LPENMRVTKI SRLIFTNSGN AILALASNAI 780
  781 HLLWKWQRND RNATGKATAS LPPQQWQPAS GILMTNDVAE TNPEEAVPCF ALSKNDSYVM 840
  841 SASGGKISLF NMMTFKTMAT FMPPPPAATF LAFHPQDNNI IAIGMDDSTI QIYNVRVDEV 900
  901 KSKLKGHSKR ITGLAFSNVL NVLVSSGADA QLCVWNTDGW EKQKSKVLQI PQGRSTSSLS 960
  961 DTRVQFHQDQ VHFLVVHETQ LAIYETTKLE CMKQWPVRES AAPITHATFS CDSQLIYTSF1020
 1021 MDATICVFSS ANLRLRCRVN PSAYLPASLS NSNVHPLVIA AHPQESNMFA VGLSDGGVHI1080
 1081 FEPLESEGKW GVAPPPENGS ASAVTATPSV GASASDQPQR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..136] deduced N/A No confident structure predictions are available.
    2 View Details [137..187] PSI-BLAST 79.30103 PAF-AH Holoenzyme: Lis1/Alfa2
    3 View Details [188..388] PSI-BLAST 35.221849 No description for 3c99A was found.
    4 View Details [389..888] PSI-BLAST 60.154902 Actin interacting protein 1
    5 View Details [889..970] PSI-BLAST 8.221849 No description for 2oitA was found.
    6 View Details [971..1120] PSI-BLAST 81.69897 No description for 2gnqA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle