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Protein Overview: gi|15220049

General Information:
Name(s) found: gi|15220049 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|15220049|ref|NP_178124.1| SUS2 (ABNORMAL SUSPENSOR 2) [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 2382 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWNNNDGMPL APPGTGGSMM PPPPAAHPSY TALPPPSNPT PPVEPTPEEA EAKLEEKARK  60
   61 WMQLNSKRYG DKRKFGFVET QKEDMPPEHV RKIIRLVFFS SFSTISKYSL LDNYFLARDH 120
  121 GDMSSKKFRH DKRVYLGALK FVPHAVFKLL ENMPMPWEQV RDVKVLYHIT GAITFVNEIP 180
  181 WVVEPIYMAQ WGTMWIMMRR EKRDRRHFKR MRFPPFDDEE PPLDYADNLL DVDPLEPIQL 240
  241 ELDEEEDSAV HTWFYDHKPL VKTKLINGPS YRRWNLSLPI MATLHRLAGQ LLSDLIDRNY 300
  301 FYLFDMPSFF TAKALNMCIP GGPKFEPLYR DMEKGDEDWN EFNDINKLII RSPLRTEYRI 360
  361 AFPHLYNNRP RKVKLCVYHS PMIMYIKTED PDLPAFYYDP LIHPISNTNK EKRERKVYDD 420
  421 EDDFALPEGV EPLLRDTQLY TDTTAAGISL LFAPRPFNMR SGRTRRAEDI PLVSEWFKEH 480
  481 CPPAYPVKVR VSYQKLLKCY VLNELHHRPP KAQKKKHLFR SLAATKFFQS TELDWVEVGL 540
  541 QVCRQGYNML NLLIHRKNLN YLHLDYNFNL KPVKTLTTKE RKKSRFGNAF HLCREILRLT 600
  601 KLVVDANVQF RLGNVDAFQL ADGLQYIFSH VGQLTGMYRY KYRLMRQIRM CKDLKHLIYY 660
  661 RFNTGPVGKG PGCGFWAPMW RVWLFFLRGI VPLLERWLGN LLARQFEGRH SKGVAKTVTK 720
  721 QRVESHFDLE LRAAVMHDVL DAMPEGIKQN KARTILQHLS EAWRCWKANI PWKVPGLPVP 780
  781 IENMILRYVK SKADWWTNVA HYNRERIRRG ATVDKTVCRK NLGRLTRLWL KAEQERQHNY 840
  841 LKDGPYVTPE EALAIYTTTV HWLESRKFSP IPFPPLSYKH DTKLLILALE RLKESYSVAV 900
  901 RLNQQQREEL GLIEQAYDNP HEALSRIKRH LLTQRGFKEV GIEFMDLYSY LIPVYEIEPL 960
  961 EKITDAYLDQ YLWYEGDKRH LFPNWIKPAD SEPPPLLVYK WCQGINNLQG IWDTGDGQCV1020
 1021 VMLQTKFEKF FEKIDLTMLN RLLRLVLDHN IADYVSAKNN VVLSYKDMSH TNSYGLIRGL1080
 1081 QFASFVVQFY GLLLDLLLLG LTRASEIAGP PQMPNEFMTF WDTKVETRHP IRLYSRYIDK1140
 1141 VHIMFKFTHE EARDLIQRYL TEHPDPNNEN MVGYNNKKCW PRDARMRLMK HDVNLGRSVF1200
 1201 WDMKNRLPRS ITTLEWENGF VSVYSKDNPN LLFSMCGFEV RILPKIRMTQ EAFSNTKDGV1260
 1261 WNLQNEQTKE RTAVAFLRVD DEHMKVFENR VRQILMSSGS TTFTKIVNKW NTALIGLMTY1320
 1321 FREATVHTQE LLDLLVKCEN KIQTRIKIGL NSKMPSRFPP VIFYTPKEIG GLGMLSMGHI1380
 1381 LIPQSDLRYS KQTDVGVTHF RSGMSHEEDQ LIPNLYRYIQ PWESEFIDSQ RVWAEYALKR1440
 1441 QEAQAQNRRL TLEDLEDSWD RGIPRINTLF QKDRHTLAYD KGWRVRTDFK QYQVLKQNPF1500
 1501 WWTHQRHDGK LWNLNNYRTD VIQALGGVEG ILEHTLFKGT YFPTWEGLFW EKASGFEESM1560
 1561 KYKKLTNAQR SGLNQIPNRR FTLWWSPTIN RANVYVGFQV QLDLTGIFMH GKIPTLKISL1620
 1621 IQIFRAHLWQ KIHESVVMDL CQVLDQELDA LEIETVQKET IHPRKSYKMN SSCADVLLFA1680
 1681 AHKWPMSKPS LVAESKDMFD QKASNKYWID VQLRWGDYDS HDIERYTRAK FMDYTTDNMS1740
 1741 IYPSPTGVMI GLDLAYNLHS AFGNWFPGSK PLLAQAMNKI MKSNPALYVL RERIRKGLQL1800
 1801 YSSEPTEPYL SSQNYGEIFS NQIIWFVDDT NVYRVTIHKT FEGNLTTKPI NGAIFIFNPR1860
 1861 TGQLFLKVIH TSVWAGQKRL GQLAKWKTAE EVAALVRSLP VEEQPKQIIV TRKGMLDPLE1920
 1921 VHLLDFPNIV IKGSELQLPF QACLKIEKFG DLILKATEPQ MVLFNIYDDW LKSISSYTAF1980
 1981 SRLILILRAL HVNNEKAKML LKPDKSVVTE PHHIWPSLTD DQWMKVEVAL RDLILSDYAK2040
 2041 KNNVNTSALT QSEIRDIILG AEITPPSQQR QQIAEIEKQA KEASQLTAVT TRTTNVHGDE2100
 2101 LIVTTTSPYE QSAFGSKTDW RVRAISATNL YLRVNHIYVN SDDIKETGYT YIMPKNILKK2160
 2161 FICVADLRTQ IAGYLYGISP PDNPQVKEIR CVVMVPQWGN HQLVHLPSSL PEHDFLNDLE2220
 2221 PLGWLHTQPN ELPQLSPQDV TSHSRILENN KQWDGEKCII LTCSFTPGSC SLTSYKLTQT2280
 2281 GYEWGRLNKD NGSNPHGYLP THYEKVQMLL SDRFLGFYMV PESGPWNYSF TGVKHTLSMK2340
 2341 YSVKLGSPKE FYHEEHRPTH FLEFSNMEEA DITEGDREDT FT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..83] deduced N/A No confident structure predictions are available.
    2 View Details [84..260] Pfam 111.309804 No description for PF08082.2 was found. No confident structure predictions are available.
    3 View Details [261..335] deduced N/A No confident structure predictions are available.
    4 View Details [336..505] MSA 1.029966 View MSA. No confident structure predictions are available.
    5 View Details [506..579] deduced N/A No confident structure predictions are available.
    6 View Details [580..673] MSA 1.031953 View MSA. No confident structure predictions are available.
    7 View Details [674..869] deduced N/A No confident structure predictions are available.
    8 View Details [870..1099] deduced N/A No confident structure predictions are available.
    9 View Details [1100..1190] deduced N/A No confident structure predictions are available.
    10 View Details [1191..1305] MSA 1.03595 View MSA. No confident structure predictions are available.
    11 View Details [1306..1499] deduced N/A No confident structure predictions are available.
    12 View Details [1500..1553] MSA 3.038986 View MSA. No confident structure predictions are available.
    13 View Details [1554..1625] MSA 1.035964 View MSA. No confident structure predictions are available.
    14 View Details [1626..1718] deduced N/A No confident structure predictions are available.
    15 View Details [1719..1973] MSA 1.033952 View MSA. No confident structure predictions are available.
    16 View Details [1974..2064] deduced N/A No confident structure predictions are available.
    17 View Details [2065..2382] PSI-BLAST 132.0 No description for 2p87A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle