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Protein Overview: PPR32_ARATH

General Information:
Name(s) found: PPR32_ARATH [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
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  • Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 809 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: mRNA modification [IMP]
    Molecular Function: endonuclease activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSQLVQFST VPQIPNPPSR HRHFLSERNY IPANVYEHPA ALLLERCSSL KELRQILPLV  60
   61 FKNGLYQEHF FQTKLVSLFC RYGSVDEAAR VFEPIDSKLN VLYHTMLKGF AKVSDLDKAL 120
  121 QFFVRMRYDD VEPVVYNFTY LLKVCGDEAE LRVGKEIHGL LVKSGFSLDL FAMTGLENMY 180
  181 AKCRQVNEAR KVFDRMPERD LVSWNTIVAG YSQNGMARMA LEMVKSMCEE NLKPSFITIV 240
  241 SVLPAVSALR LISVGKEIHG YAMRSGFDSL VNISTALVDM YAKCGSLETA RQLFDGMLER 300
  301 NVVSWNSMID AYVQNENPKE AMLIFQKMLD EGVKPTDVSV MGALHACADL GDLERGRFIH 360
  361 KLSVELGLDR NVSVVNSLIS MYCKCKEVDT AASMFGKLQS RTLVSWNAMI LGFAQNGRPI 420
  421 DALNYFSQMR SRTVKPDTFT YVSVITAIAE LSITHHAKWI HGVVMRSCLD KNVFVTTALV 480
  481 DMYAKCGAIM IARLIFDMMS ERHVTTWNAM IDGYGTHGFG KAALELFEEM QKGTIKPNGV 540
  541 TFLSVISACS HSGLVEAGLK CFYMMKENYS IELSMDHYGA MVDLLGRAGR LNEAWDFIMQ 600
  601 MPVKPAVNVY GAMLGACQIH KNVNFAEKAA ERLFELNPDD GGYHVLLANI YRAASMWEKV 660
  661 GQVRVSMLRQ GLRKTPGCSM VEIKNEVHSF FSGSTAHPDS KKIYAFLEKL ICHIKEAGYV 720
  721 PDTNLVLGVE NDVKEQLLST HSEKLAISFG LLNTTAGTTI HVRKNLRVCA DCHNATKYIS 780
  781 LVTGREIVVR DMQRFHHFKN GACSCGDYW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..147] PSI-BLAST 5.522879 No description for 3cvqA was found.
    2 View Details [148..331] PSI-BLAST 10.69897 No description for 2q7fA was found.
    3 View Details [332..717] PSI-BLAST 11.0 No description for 2gw1A was found.
    4 View Details [718..809] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle