YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: LUP4_ARATH

General Information:
Name(s) found: LUP4_ARATH [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
SHOW ALL
  • Beta-amyrin synthase OS=Arabidopsis thaliana GN=BAS PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 759 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: beta-amyrin synthase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRLKIGEGN GDDPYLFTTN NFAGRQTWEF DPDGGSPEER HSVVEARRIF YDNRFHVKAS  60
   61 SDLLWRMQFL REKKFEQRIA PVKVEDSEKV TFETATSALR RGIHFFSALQ ASDGHWPAEN 120
  121 AGPLFFLPPL VFCLYITGHL DEVFTSEHRK EILRYIYCHQ KEDGGWGLHI EGHSTMFCTT 180
  181 LNYICMRILG ESPDGGHDNA CGRAREWILS HGGVTYIPSW GKTWLSILGV FDWSGSNPMP 240
  241 PEFWILPSFF PVHPAKMWSY CRMVYLPMSY LYGKRFVGPI TSLILQLRKE LYLQPYEEIN 300
  301 WMKVRHLCAK EDTYYPRPLV QELVWDSLYI FAEPFLARWP FNKLLREKAL QLAMKHIHYE 360
  361 DENSRYITIG CVEKVLCMLA CWVEDPNGDY FKKHLSRISD YLWMAEDGMK MQSFGSQLWD 420
  421 TGFAMQALLA SNLSSEISDV LRRGHEFIKN SQVGENPSGD YKSMYRHISK GAWTFSDRDH 480
  481 GWQVSDCTAH GLKCCLLFSM LAPDIVGPKQ DPERLHDSVN ILLSLQSKNG GMTAWEPAGA 540
  541 PKWLELLNPT EMFSDIVIEH EYSECTSSAI QALSLFKQLY PDHRTTEITA FIKKAAEYLE 600
  601 NMQTRDGSWY GNWGICFTYG TWFALAGLAA AGKTFNDCEA IRKGVQFLLA AQKDNGGWGE 660
  661 SYLSCSKKIY IAQVGEISNV VQTAWALMGL IHSGQAERDP IPLHRAAKLI INSQLESGDF 720
  721 PQQQATGVFL KNCTLHYAAY RNIHPLWALA EYRARVSLP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..759] PSI-BLAST 1000.0 Structure of human OSC in complex with Lanosterol

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • lanosterol synthase activity
    		•  3.72954210081462 bayes_pls_golite062009
  • oxidosqualene cyclase activity
    		•  3.70516211286781 bayes_pls_golite062009
  • prenyltransferase activity
    		•  3.525366989371 bayes_pls_golite062009
  • isoprenoid binding
    		•  1.59014951619756 bayes_pls_golite062009
  • binding
    		•  0.663474225223042 bayes_pls_golite062009
  • protein prenyltransferase activity
    		•  0.55742738134604 bayes_pls_golite062009
  • catalytic activity
    		•  0.497699107100544 bayes_pls_golite062009
  • protein binding
    		•  0.172880799019885 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.73

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle