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Protein Overview: AGL66_ARATH

General Information:
Name(s) found: AGL66_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|91806109|gb|ABE65783.1| MADS-box family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|42563302|ref|NP_177921.2| AGL66 (AGAMOUS-LIKE 66); transcription factor [Arabidopsis thaliana] [NCBI NR]
  • Agamous-like MADS-box protein AGL66 OS=Arabidopsis thaliana GN=AGL66 PE=1 SV=1 [Swiss-Prot]
  • MADS-box family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 MADS-box family protein, MADS-box protein AGL66 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: AGL66 | AGL66; transcription factor | chr1:29320106-29321961 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: AGL66 | AGAMOUS-like 66 | chr1:29315212-29317067 REVERSE LENGTH=332 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • MADS-box family protein OS=Arabidopsis thaliana GN=AGL66 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 332 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: pollen development [IGI]
    regulation of transcription [TAS]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRVKLEIKR IENTTNRQVT FSKRRNGLIK KAYELSILCD IDIALLMFSP SDRLSLFSGK  60
   61 TRIEDVFSRY INLSDQEREN ALVFPDQSRR PDFQSKEYLL RTLQQLKAEN DIALQLTNPT 120
  121 AINSDVEELE HEVYKLQQQL LMAEEELRKY EPDPIRFTTM EEYETCEKQL MDTLTRVNQR 180
  181 REHILSQDQL SSYEASALQQ QQSMGGPFGN DVVGGWLTEN GPNEAHLFDA SAHSAMYETL 240
  241 LQGSSSSSNQ NNIMGESNVS NHNGDMFQEW AQAYNSTTAH NPSTLFPPMQ HQHGLVVDPN 300
  301 IEEIEIPVMK KDAQADHEVS DYDIRMPQLS SQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] PSI-BLAST 22.69897 Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2
    2 View Details [115..242] MSA 9.502996 View MSA. No confident structure predictions are available.
    3 View Details [243..332] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.0368771990474 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle