YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|15221597

General Information:
Name(s) found: gi|15221597 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|15221597|ref|NP_177070.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | binding | chr1:25971084-25975052 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nop14-like protein (InterPro:IPR007276); Has 69842 Blast hits to 35213 proteins in 1572 species: Archae - 363; Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants - 2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI BLink). | chr1:25967421-25971389 REVERSE LENGTH=901 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Uncharacterized protein OS=Arabidopsis thaliana GN=At1g69070 PE=4 SV=1 [ARATH-contam.fasta]
  • Uncharacterized protein OS=Arabidopsis thaliana GN=At1g69070 PE=1 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 901 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKDNKMKKK PNKKGERRMG PDAVAMKAKT QKVDNPFESI RSRRKFDILG KKRKGEERFV  60
   61 SVSRTRAVDK RKNTLEKEYE QSLKSSVFLD KRIGEQNDEL GEFDKGIIRS QRQRQLKLAK 120
  121 KSMYNLSDGE EDVYEDGALG GSSVKDDFDS GLLSDEDLQD DDLEASASKR LKHLNRNREV 180
  181 DASGEEERRK SKKEVMEEII MKSKLGRMEK AKQKEEKGKL MDELDKNFKS LVNSEAMESL 240
  241 TKPFVAEENT RDPYLLSLND MSMEIRARPS ERTKTPEEIA QKEREKLEAL EEERKKRMQE 300
  301 TEELSDGDEE IGGEESTKRL TVISGDDLGD SFSVEEDKPK RGWIDDVLER EDNVDNSESD 360
  361 EDEDSESEEE EDDDGESDGG DEKQRKGHHL EDWEQSDDEL GAELEDEEED DDEEDDDEED 420
  421 AELRVHKKLK NDYAAPYKGE GLSGTVKEKT NMKKMSSTQR DIPFMIDPPK NFEELLALVE 480
  481 DCSNEDVILI VNRIRIAHSI KIKAENRKKM QVFYGVLLQY FAVLASKKPL NFDLLNMLVK 540
  541 PLIEMSMEIP YFAAICARQR LLKTRSQFCE AIKNPEDGCW PSLKTLFLLR LWSLIFPCSD 600
  601 FRHAVMTPSI LLMCEYLMRC PISSGRDIAI GSFLCSIVLL QSKKFCPEAI LFIRTLLMAA 660
  661 SDKKSPASAE SEFYHFMELK SLTPLLCIQD NVKEVMPLNF LKIMNEPADS PYFSSDDFRA 720
  721 SILSSVVETL EGFVEINGGL SSFPEIFMPI STLLHQIGNQ EKIPQTLKEK LEDVAKLIEK 780
  781 KTDDHHKERK PLSMRKHKPV AIRMVNPKFE ENFVPGMDND PDKYRSDLKK LKRKLKREAR 840
  841 GAVRELRKDS YFMSTVKAKE KAAHEQERAE KHGKAWAFLQ EQEHAFKSGQ LGKGKGKKRR 900
  901 R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..323] PSI-BLAST 14.0 Heavy meromyosin subfragment
    2 View Details [324..408] PSI-BLAST 4.69897 No description for 2dfsA was found.
    3 View Details [409..596] PSI-BLAST 4.30103 No description for 2i1jA was found.
    4 View Details [597..689] deduced N/A No confident structure predictions are available.
    5 View Details [690..818] deduced N/A No confident structure predictions are available.
    6 View Details [819..901] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle