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Protein Overview: PPR91_ARATH

General Information:
Name(s) found: PPR91_ARATH [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
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  • Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=3 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 630 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    Biological Process: RNA 5'-end processing [IMP]
    Molecular Function: RNA binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRISFAIAST AKRFVHRSLV VRGNAATVSP SFSFFWRRAF SGKTSYDYRE KLSRNGLSEL  60
   61 KLDDAVALFG EMVKSRPFPS IIEFSKLLSA IAKMNKFDVV ISLGEQMQNL GIPHNHYTYS 120
  121 ILINCFCRRS QLPLALAVLG KMMKLGYEPN IVTLSSLLNG YCHSKRISEA VALVDQMFVT 180
  181 GYQPNTVTFN TLIHGLFLHN KASEAMALID RMVAKGCQPD LVTYGVVVNG LCKRGDTDLA 240
  241 FNLLNKMEQG KLEPGVLIYN TIIDGLCKYK HMDDALNLFK EMETKGIRPN VVTYSSLISC 300
  301 LCNYGRWSDA SRLLSDMIER KINPDVFTFS ALIDAFVKEG KLVEAEKLYD EMVKRSIDPS 360
  361 IVTYSSLING FCMHDRLDEA KQMFEFMVSK HCFPDVVTYN TLIKGFCKYK RVEEGMEVFR 420
  421 EMSQRGLVGN TVTYNILIQG LFQAGDCDMA QEIFKEMVSD GVPPNIMTYN TLLDGLCKNG 480
  481 KLEKAMVVFE YLQRSKMEPT IYTYNIMIEG MCKAGKVEDG WDLFCNLSLK GVKPDVVAYN 540
  541 TMISGFCRKG SKEEADALFK EMKEDGTLPN SGCYNTLIRA RLRDGDREAS AELIKEMRSC 600
  601 GFAGDASTIG LVTNMLHDGR LDKSFLDMLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..630] PSI-BLAST 16.221849 Clathrin D6 Coat


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.46

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle