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Protein Overview: gi|110742831, gi...

General Information:
Name(s) found: gi|30695934 [NCBI NR]
gi|110742831 [NCBI NR]
Description(s) found:
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  • gi|30695934|ref|NP_849810.1| carbohydrate binding / catalytic [Arabidopsis thaliana] [NCBI NR]
  • gi|110742831|dbj|BAE99314.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | carbohydrate binding / catalytic | chr1:20678518-20679523 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: NDF5 | NDH-dependent cyclic electron flow 5 | chr1:20674852-20675857 FORWARD LENGTH=308 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • NDH-dependent cyclic electron flow 5 OS=Arabidopsis thaliana GN=NDF5 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of Q9C503, Isoform 2 of Protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 OS=Arabidopsis thaliana GN=NDF5 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 308 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: catalytic activity [IEA]
    carbohydrate binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALVHYMNVS RSTFPLSRSS KINLSSSFAS LPLQFHKNIK RLESSVPPSA SASASPAFPI  60
   61 DVEYLRREFS GHGATFEDIG ETCIARLKLD NGSSANVMLT RGMITSYKVR VWHGGKVELL 120
  121 HTWVEQEEEE VVIRGGVSSA FRSSDSDEIS DWRLQGISGD SKDCVQMELR RSDKKIKEIE 180
  181 LKQIISLREN TLSIELSMTN KGISPIKLEG CSLVSYLTVS TPEATYAVGL EGSDFVETTP 240
  241 FLPRFGVVQG EKEEEKPGFG GEEESNYKQL NREMSRIYTC APKSFTVIDR VVILTKLQLY 300
  301 LNFLCGFI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..308] PSI-BLAST 47.39794 No description for 2htaA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle