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Protein Overview: gi|42571869

General Information:
Name(s) found: gi|42571869 [NCBI NR]
Description(s) found:
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  • gi|42571869|ref|NP_974025.1| PHD finger protein-related [Arabidopsis thaliana] [NCBI NR]
  • PHD finger protein-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 PHD finger protein-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | PHD finger protein-related | chr1:20308500-20310610 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ING2 | PHD finger protein-related | chr1:20304833-20306943 REVERSE LENGTH=328 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • PHD finger protein-like protein OS=Arabidopsis thaliana GN=ING2 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of B3H615, Inhibitor of growth 2 OS=Arabidopsis thaliana GN=ING2 PE=4 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 328 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: NONE FOUND
    Molecular Function: methylated histone residue binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIARTGVYV DDYLEYASTF PAELQRLLNT VRELDERSQS LINQTRQQTK YCLGLASQSS  60
   61 KKGNGNHYNN GGLDEEETIE KMRKEIESSQ ENALSLCTEK VLLARQAYDL IDSHVKRLDE 120
  121 DLNNFAEDLK QEGKIPPDEP SVLPPLPIVP KAEKRKSFYG TPQPKKIDYR DRDWDRDRDF 180
  181 ELMPPPGSNR KDLMPIEEQP IDPNEPTYCV CHQVSFGDMI ACDNENVSLL SQHLIIYFLM 240
  241 YSCYDETFCS CFDSAKEVNG FTIHALASHL RPDSKGNGTA PPADSSHSHT NIICTCEKVP 300
  301 LASSLAPSLH DQCHQTHLSC YPTSSKCK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..177] MSA 23.353996 View MSA. No confident structure predictions are available.
    2 View Details [178..264] PSI-BLAST 13.0 Solution structure of PHD domain in ING1-like protein BAC25009
    3 View Details [265..328] MSA 25.324997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle