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Protein Overview: gi|15221015

General Information:
Name(s) found: gi|15221015 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|15221015|ref|NP_172361.1| emb2411 (embryo defective 2411); ATP binding / ATP-dependent DNA helicase/ DNA binding [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1296 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPRKKPKSS ALKSNKQSSA NHSSQPSTFG IQQLFLRHIQ NSQSTSNSHT STADPVDQQN  60
   61 VNGLASDTAV LTPQNPLGTS NEKPDESKDM DQQLTEASPK ISKNLKRFSP GMLIKQSQDD 120
  121 CGGEITWKIS PVNERLRAAA KNIPKMMDLT ENSLGKQCPT SGITSKVEQW LSSPSKKASK 180
  181 RPAFATNRVM ERVNPSPDAE FEIVNTSSSG NSPFQTPPSL SCPHNKLPCT VTCSGACGSM 240
  241 GAGQHKKALL ELLDQVEDVI AVDDKTTDDV GIVMPQARVK DDIISSVVDC AVDEGPVSLP 300
  301 KMQNSINPDS YFLVLEVSEK RGSGSSSKGQ CPYKVLRLLD EHTGVECALY LWDEWFYSTV 360
  361 SPGDSINVIG EFDGDGKCDV DRQNNFLIVH PDTLVAGTRV AASFGCPRRT VLDERLRSNE 420
  421 HATVALLGTL QHQVFQAGLS QESPSVDGLQ EYASTVIEKS IESLYACGVH EGDVRSTLFK 480
  481 AIPKMLNWIE HFRYSKDSEV SKVDFGSTIG KKAVKVSEVI DIEEMSWAPK YGLKGMIDAS 540
  541 VRVIVESDMN TVNEKIMPLE FKSGKAPSGQ SSIEHSAQVI LYTLLMSERY LKHIDNGLLY 600
  601 YLQSDQTQGI SVQRSDLVGL IIRRNELAND ILVASTTQQL PPMLRADGGN TESSGLGDVF 660
  661 DTHVSHLSTL HFNFLRHWDR LIDLEGREMQ LLRKDIAHPH GSKGSHSASY LSSMVLDVTN 720
  721 GFQHHNSHKE TRFIYRFVRQ KSSESRERVT SEDMIRTGNL ATDDLDCKLR TGDRVILRTE 780
  781 VSHLTVANGI IADISRTHIS VSLSKRLRLP WSEPSSEVSN LSHELWRIYK DEFMTSFSVM 840
  841 RFNLMQLFVQ NGHNIRKMIV DLEPPRFDNG SILSQDPAIS YIWSEKSLNN DQRQAILKIL 900
  901 TAKDYALILG MPGTGKTSTM VHAVKALLIR GSSILLASYT NSAVDNLLIK LKAQGIEFLR 960
  961 IGRDEAVHEE VRESCFSAMN MCSVEDIKKK LDQVKVVAST CLGINSPLLV NRRFDVCIID1020
 1021 EAGQIALPVS IGPLLFASTF VLVGDHYQLP PLVQSTEARE NGMGISLFRR LSEAHPQAIS1080
 1081 VLQNQYRMCR GIMELSNALI YGDRLCCGSA EVADATLVLS TSSSTSPWLK KVLEPTRTVV1140
 1141 FVNTDMLRAF EARDQNAINN PVEASIIAEI VEELVNNGVD SKDIGIITPY NSQASLIQHA1200
 1201 IPTTPVEIHT IDKYQGRDKD CILVSFVRSR EKPRSSASSL LGDWHRINVA LTRAKKKLIM1260
 1261 VGSQRTLSRV PLLMLLLNKV KEQSGILNLL PGDLKP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..210] MSA 5.356996 View MSA. No confident structure predictions are available.
    2 View Details [211..405] deduced N/A No confident structure predictions are available.
    3 View Details [406..521] deduced N/A No confident structure predictions are available.
    4 View Details [522..562] deduced N/A No confident structure predictions are available.
    5 View Details [563..698] deduced N/A No confident structure predictions are available.
    6 View Details [699..1296] PSI-BLAST 130.0 No description for 2gjkA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle